RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 HTTP42858 3142 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 NOP56O00567 594 aaKnown RBP21.28■■□□□ 1
RAB40C-207ENST00000563109 SORBS3O60504 671 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 GAS7O60861 476 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 ATP9AO75110 1047 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 BMP15O95972 392 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 MYCNP04198 464 aaPredicted RBP21.28■■□□□ 1
RAB40C-207ENST00000563109 C6orf222P0C671 652 aaPredicted RBP21.28■■□□□ 1
RAB40C-207ENST00000563109 DDIT3P35638 169 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 CPT1AP50416 773 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 GJA9P57773 515 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 ITGB3BPQ13352 177 aaPredicted RBP21.28■■□□□ 1
RAB40C-207ENST00000563109 LRCH2Q5VUJ6 765 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 CYFIP1Q7L576 1253 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 RNF180Q86T96 592 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 ETNPPLQ8TBG4 499 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 U2AF1L4Q8WU68 220 aaKnown RBP21.28■■□□□ 1
RAB40C-207ENST00000563109 SLC5A5Q92911 643 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 ABHD8Q96I13 439 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 FAM20AQ96MK3 541 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 SPATA33Q96N06 139 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 ZNF396Q96N95 335 aaPredicted RBP21.28■■□□□ 1
RAB40C-207ENST00000563109 RIT2Q99578 217 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 TEKT3Q9BXF9 490 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 KCNMB3Q9NPA1 279 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 CEP131Q9UPN4 1083 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 ATP6V1DQ9Y5K8 247 aa21.28■■□□□ 1
RAB40C-207ENST00000563109 FARP2O94887 1054 aaPredicted RBP21.27■■□□□ 1
RAB40C-207ENST00000563109 SGPL1O95470 568 aa21.27■■□□□ 1
RAB40C-207ENST00000563109 PGK1P00558 417 aa21.27■■□□□ 1
RAB40C-207ENST00000563109 CAPN2P17655 700 aa21.27■■□□□ 1
RAB40C-207ENST00000563109 ARRDC4Q8NCT1 418 aa21.27■■□□□ 1
RAB40C-207ENST00000563109 UIMC1Q96RL1 719 aa21.27■■□□□ 1
RAB40C-207ENST00000563109 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.27■■□□□ 1
RAB40C-207ENST00000563109 SLC9A2Q9UBY0 812 aa21.27■■□□□ 1
RAB40C-207ENST00000563109 DDX39AO00148 427 aaKnown RBP21.26■□□□□ 0.99
RAB40C-207ENST00000563109 LAD1O00515 517 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 ZEB2O60315 1214 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 TFRCP02786 760 aaKnown RBP21.26■□□□□ 0.99
RAB40C-207ENST00000563109 OR52Z1P0C646 297 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 PTGS1P23219 599 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 GJA8P48165 433 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 KRT76Q01546 638 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 SP4Q02446 784 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 FSCN1Q16658 493 aaKnown RBP21.26■□□□□ 0.99
RAB40C-207ENST00000563109 FAM173BQ6P4H8 233 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 PPTC7Q8NI37 304 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 OGDHLQ9ULD0 1010 aa21.26■□□□□ 0.99
RAB40C-207ENST00000563109 KBTBD13C9JR72 458 aa21.25■□□□□ 0.99
RAB40C-207ENST00000563109 ADAMTS4O75173 837 aa21.25■□□□□ 0.99
RAB40C-207ENST00000563109 CST5P28325 142 aaPredicted RBP21.25■□□□□ 0.99
RAB40C-207ENST00000563109 AFG1LQ8WV93 481 aa21.25■□□□□ 0.99
RAB40C-207ENST00000563109 CRISPLD2Q9H0B8 497 aa21.25■□□□□ 0.99
RAB40C-207ENST00000563109 ZDHHC9Q9Y397 364 aa21.25■□□□□ 0.99
RAB40C-207ENST00000563109 MMP3P08254 477 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 NKX3-2P78367 333 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 PTGDRQ13258 359 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 LRRC41Q15345 812 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 SF3A1Q15459 793 aaKnown RBP21.24■□□□□ 0.99
RAB40C-207ENST00000563109 TMEM266Q2M3C6 531 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 GNASQ5JWF2 1037 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 ZNF746Q6NUN9 644 aaPredicted RBP21.24■□□□□ 0.99
RAB40C-207ENST00000563109 PCSK9Q8NBP7 692 aaKnown RBP21.24■□□□□ 0.99
RAB40C-207ENST00000563109 HAS1Q92839 578 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 TMEM60Q9H2L4 133 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 CHMP5Q9NZZ3 219 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 ELP1O95163 1332 aa21.24■□□□□ 0.99
RAB40C-207ENST00000563109 A6NJR5 290 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 DHX15O43143 795 aaKnown RBP21.23■□□□□ 0.99
RAB40C-207ENST00000563109 PSMD10O75832 226 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 TXKP42681 527 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 BEX3Q00994 111 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 DGKDQ16760 1214 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 HSDL1Q3SXM5 330 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 FOXD4L6Q3SYB3 417 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-207ENST00000563109 ATL3Q6DD88 541 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 FOXD4L3Q6VB84 417 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-207ENST00000563109 SMAP1Q8IYB5 467 aaPredicted RBP21.23■□□□□ 0.99
RAB40C-207ENST00000563109 GJA10Q969M2 543 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 MTMR9Q96QG7 549 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 BCAS3Q9H6U6 928 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 POLR3EQ9NVU0 708 aa21.23■□□□□ 0.99
RAB40C-207ENST00000563109 MYADML2A6NDP7 307 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 WDR64B1ANS9 1081 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 DNM1LO00429 736 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 CHMP2AO43633 222 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 KPNA6O60684 536 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 SFNP31947 248 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 JAK3P52333 1124 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 ACTR2P61160 394 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 ATP2C1P98194 919 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-207ENST00000563109 ANKLE1Q8NAG6 615 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 KLHDC9Q8NEP7 349 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 SEPT1Q8WYJ6 367 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 GPR20Q99678 358 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 TTC12Q9H892 705 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-207ENST00000563109 PCDHA12Q9UN75 941 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 SAMM50Q9Y512 469 aa21.22■□□□□ 0.99
RAB40C-207ENST00000563109 MYL3P08590 195 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 PRPHP41219 470 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms