RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 PFKFB2O60825 505 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 RGS20O76081 388 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 GH1P01241 217 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 TGFB3P10600 412 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 MRPS9P82933 396 aaKnown RBP18.97■□□□□ 0.63
CDT1-202ENST00000562747 SSRP1Q08945 709 aaKnown RBP18.97■□□□□ 0.63
CDT1-202ENST00000562747 LY6KQ17RY6 165 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 GNPTABQ3T906 1256 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 PPP1R13LQ8WUF5 828 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 ATXN2LQ8WWM7 1075 aaKnown RBP18.97■□□□□ 0.63
CDT1-202ENST00000562747 COPS5Q92905 334 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 ASB2Q96Q27 587 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 C22orf23Q9BZE7 217 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 MTIF3Q9H2K0 278 aaKnown RBP18.97■□□□□ 0.63
CDT1-202ENST00000562747 SLC28A3Q9HAS3 691 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 PCDHA6Q9UN73 950 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 PCDHA8Q9Y5H6 950 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 SCN10AQ9Y5Y9 1956 aa18.97■□□□□ 0.63
CDT1-202ENST00000562747 CDKL5O76039 1030 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 FOSP01100 380 aaPredicted RBP18.96■□□□□ 0.63
CDT1-202ENST00000562747 CYP2C9P11712 490 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 RBM25P49756 843 aaKnown RBP18.96■□□□□ 0.63
CDT1-202ENST00000562747 PURAQ00577 322 aaKnown RBP18.96■□□□□ 0.63
CDT1-202ENST00000562747 SCRN1Q12765 414 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 CCDC148Q8NFR7 591 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 ADAMTS19Q8TE59 1207 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 INPP4AQ96PE3 977 aaPredicted RBP18.96■□□□□ 0.63
CDT1-202ENST00000562747 ZMYND12Q9H0C1 365 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 POLR3EQ9NVU0 708 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
CDT1-202ENST00000562747 A6NJR5 290 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 KPNA6O60684 536 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 DEXIO95424 95 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 ICAM3P32942 547 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 CLK2P49760 499 aaKnown RBP18.95■□□□□ 0.62
CDT1-202ENST00000562747 AP3B2Q13367 1082 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 PPP2R2DQ66LE6 453 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 EMID1Q96A84 441 aaPredicted RBP18.95■□□□□ 0.62
CDT1-202ENST00000562747 SEZ6LQ9BYH1 1024 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 UPF2Q9HAU5 1272 aaKnown RBP18.95■□□□□ 0.62
CDT1-202ENST00000562747 C6orf50Q9HD87 102 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 SH3GLB2Q9NR46 395 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 SLC4A7Q9Y6M7 1214 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 PTPRSQ13332 1948 aa18.95■□□□□ 0.62
CDT1-202ENST00000562747 ZBBXA8MT70 800 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 MYL3P08590 195 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 GNA11P29992 359 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 ARHGAP1Q07960 439 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 LAMC2Q13753 1193 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 MCTP2Q6DN12 878 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 KIF2CQ99661 725 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 RAPGEFL1Q9UHV5 662 aa18.94■□□□□ 0.62
CDT1-202ENST00000562747 XIRP2A4UGR9 3374 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 FIBPO43427 364 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 ATP2A2P16615 1042 aaKnown RBP18.93■□□□□ 0.62
CDT1-202ENST00000562747 MRPS5P82675 430 aaKnown RBP18.93■□□□□ 0.62
CDT1-202ENST00000562747 ME3Q16798 604 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 DEFB128Q7Z7B8 93 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 NLRX1Q86UT6 975 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 DHX37Q8IY37 1157 aaKnown RBP18.93■□□□□ 0.62
CDT1-202ENST00000562747 FAM177A1Q8N128 213 aaPredicted RBP18.93■□□□□ 0.62
CDT1-202ENST00000562747 BICD2Q8TD16 824 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 ZFP91Q96JP5 570 aaPredicted RBP18.93■□□□□ 0.62
CDT1-202ENST00000562747 ANO3Q9BYT9 981 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 RTEL1Q9NZ71 1219 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 PCDHA11Q9Y5I1 949 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 TRANK1O15050 2925 aa18.93■□□□□ 0.62
CDT1-202ENST00000562747 BDP1A6H8Y1 2624 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
CDT1-202ENST00000562747 SPATA31C2B4DYI2 1134 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 COL9A1P20849 921 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 UBA1P22314 1058 aaKnown RBP18.92■□□□□ 0.62
CDT1-202ENST00000562747 CELF3Q5SZQ8 465 aaKnown RBP18.92■□□□□ 0.62
CDT1-202ENST00000562747 RPUSD2Q8IZ73 545 aaKnown RBP18.92■□□□□ 0.62
CDT1-202ENST00000562747 MICALL1Q8N3F8 863 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 AFG1LQ8WV93 481 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 GPRASP2Q96D09 838 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 CDHR1Q96JP9 859 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 MTG1Q9BT17 334 aaPredicted RBP18.92■□□□□ 0.62
CDT1-202ENST00000562747 VPS54Q9P1Q0 977 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 STK36Q9NRP7 1315 aa18.92■□□□□ 0.62
CDT1-202ENST00000562747 TCF20Q9UGU0 1960 aaKnown RBP18.92■□□□□ 0.62
CDT1-202ENST00000562747 EPOPA6NHQ4 379 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 RFXAPO00287 272 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 ARHGEF15O94989 841 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 GGPS1O95749 300 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 MMP3P08254 477 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 SREBF1P36956 1147 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 SP2Q02086 613 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 NEDD9Q14511 834 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 NBPF20Q3BBV1 942 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 MYSM1Q5VVJ2 828 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 REXO1Q8N1G1 1221 aaKnown RBP18.91■□□□□ 0.62
CDT1-202ENST00000562747 PPTC7Q8NI37 304 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 GTF3C6Q969F1 213 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 NECAB3Q96P71 396 aaPredicted RBP18.91■□□□□ 0.62
CDT1-202ENST00000562747 UHRF1Q96T88 793 aaPredicted RBP18.91■□□□□ 0.62
CDT1-202ENST00000562747 SENP7Q9BQF6 1050 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 TMEM260Q9NX78 707 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms