RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 AFG1LQ8WV93 481 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 SEZ6LQ9BYH1 1024 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 SMC3Q9UQE7 1217 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 PDE4DIPQ5VU43 2346 aa15.27■□□□□ 0.03
CDH1-204ENST00000562118 GRIN2DO15399 1336 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 CCDC194A0A1B0GVG4 234 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 KIF28PB7ZC32 967 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 HAS3O00219 553 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 ATG7O95352 703 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 F2P00734 622 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 CDK7P50613 346 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 INF2Q27J81 1249 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 PIK3AP1Q6ZUJ8 805 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 DHX37Q8IY37 1157 aaKnown RBP15.26■□□□□ 0.03
CDH1-204ENST00000562118 KAT2BQ92831 832 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 GPR20Q99678 358 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 KCNMB3Q9NPA1 279 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 POLR3EQ9NVU0 708 aa15.26■□□□□ 0.03
CDH1-204ENST00000562118 MSH4O15457 936 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 ZEB2O60315 1214 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 TDP2O95551 362 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 HOXC8P31273 242 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 ORC2Q13416 577 aaPredicted RBP15.25■□□□□ 0.03
CDH1-204ENST00000562118 CYFIP1Q7L576 1253 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 ANKRD33Q7Z3H0 272 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 PLA2G4DQ86XP0 818 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 NOSTRINQ8IVI9 506 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 HSCBQ8IWL3 235 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 SLC5A5Q92911 643 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 NAP1L4Q99733 375 aaKnown RBP15.25■□□□□ 0.03
CDH1-204ENST00000562118 C16orf70Q9BSU1 422 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 TELO2Q9Y4R8 837 aa15.25■□□□□ 0.03
CDH1-204ENST00000562118 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 IGKV6D-21A0A0A0MT36 114 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 IPO5O00410 1097 aaKnown RBP15.24■□□□□ 0.03
CDH1-204ENST00000562118 WNT7AO00755 349 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 TBX3O15119 743 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 SLC37A4O43826 429 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 LGR5O75473 907 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 TRAPPC10P48553 1259 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 SAFBQ15424 915 aaKnown RBP eCLIP15.24■□□□□ 0.03
CDH1-204ENST00000562118 DGKDQ16760 1214 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 LRRC26Q2I0M4 334 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 BRDTQ58F21 947 aaPredicted RBP15.24■□□□□ 0.03
CDH1-204ENST00000562118 SLC39A5Q6ZMH5 540 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 SESTD1Q86VW0 696 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 SPATA33Q96N06 139 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 RIT2Q99578 217 aa15.24■□□□□ 0.03
CDH1-204ENST00000562118 JPH1Q9HDC5 661 aaPredicted RBP15.24■□□□□ 0.03
CDH1-204ENST00000562118 GSTTP1A0A1W2PQM5 241 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 PSMD10O75832 226 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 CCNE2O96020 404 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 GUCY1B3Q02153 619 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 PRR16Q569H4 304 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 CXCL17Q6UXB2 119 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 HAS1Q92839 578 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 GLT1D1Q96MS3 346 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 TOX2Q96NM4 488 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 MTG1Q9BT17 334 aaPredicted RBP15.23■□□□□ 0.03
CDH1-204ENST00000562118 SENP6Q9GZR1 1112 aaPredicted RBP15.23■□□□□ 0.03
CDH1-204ENST00000562118 MLXIPQ9HAP2 919 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 TBC1D22BQ9NU19 505 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 SLC9A2Q9UBY0 812 aa15.23■□□□□ 0.03
CDH1-204ENST00000562118 MYH9P35579 1960 aaKnown RBP15.23■□□□□ 0.03
CDH1-204ENST00000562118 A0A0U1RQG5 324 aaPredicted RBP15.22■□□□□ 0.03
CDH1-204ENST00000562118 CAPN15O75808 1086 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 PDCP20941 246 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 ZNF76P36508 570 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 TOB1P50616 345 aaPredicted RBP15.22■□□□□ 0.03
CDH1-204ENST00000562118 FOSBP53539 338 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 LETM2Q2VYF4 491 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 ZNF746Q6NUN9 644 aaPredicted RBP15.22■□□□□ 0.03
CDH1-204ENST00000562118 NFRKBQ6P4R8 1299 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 FAM20AQ96MK3 541 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 PCYT2Q99447 389 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 ZNF577Q9BSK1 485 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 HTATIP2Q9BUP3 242 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 STARD7Q9NQZ5 370 aa15.22■□□□□ 0.03
CDH1-204ENST00000562118 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
CDH1-204ENST00000562118 TANC1Q9C0D5 1861 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 ARVCFO00192 962 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 CD4P01730 458 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 LGALS2P05162 132 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 ACTR2P61160 394 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 PTPN11Q06124 597 aaPredicted RBP15.21■□□□□ 0.03
CDH1-204ENST00000562118 SPIRE1Q08AE8 756 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 LARP1BQ659C4 914 aaKnown RBP15.21■□□□□ 0.03
CDH1-204ENST00000562118 ABHD15Q6UXT9 468 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 SMAP1Q8IYB5 467 aaPredicted RBP15.21■□□□□ 0.03
CDH1-204ENST00000562118 AFAP1L1Q8TED9 768 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 VAV3Q9UKW4 847 aa15.21■□□□□ 0.03
CDH1-204ENST00000562118 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.02
CDH1-204ENST00000562118 MROH7Q68CQ1 1323 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 TRIP12Q14669 1992 aaPredicted RBP15.2■□□□□ 0.02
CDH1-204ENST00000562118 PDIA4P13667 645 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms