RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 CYFIP1Q7L576 1253 aa29.17■■■□□ 2.26
MSLN-203ENST00000561896 BRF1Q92994 677 aa29.17■■■□□ 2.26
MSLN-203ENST00000561896 TIFAQ96CG3 184 aa29.17■■■□□ 2.26
MSLN-203ENST00000561896 CDX2Q99626 313 aaPredicted RBP29.17■■■□□ 2.26
MSLN-203ENST00000561896 GPR20Q99678 358 aa29.17■■■□□ 2.26
MSLN-203ENST00000561896 TET1Q8NFU7 2136 aa29.17■■■□□ 2.26
MSLN-203ENST00000561896 H3BRB1 525 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 SORBS3O60504 671 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 LGALS2P05162 132 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 ACTN1P12814 892 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 APOBRQ0VD83 1088 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 PTK7Q13308 1070 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 TYW1BQ6NUM6 668 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 PBX4Q9BYU1 374 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 TUT1Q9H6E5 874 aaKnown RBP29.16■■■□□ 2.26
MSLN-203ENST00000561896 BCAS3Q9H6U6 928 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 UBIAD1Q9Y5Z9 338 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 MYO9BQ13459 2157 aa29.16■■■□□ 2.26
MSLN-203ENST00000561896 STXBP3O00186 592 aa29.15■■■□□ 2.26
MSLN-203ENST00000561896 SELPP16109 830 aa29.15■■■□□ 2.26
MSLN-203ENST00000561896 ITGB5P18084 799 aa29.15■■■□□ 2.26
MSLN-203ENST00000561896 EVCP57679 992 aa29.15■■■□□ 2.26
MSLN-203ENST00000561896 RAB30Q15771 203 aa29.15■■■□□ 2.26
MSLN-203ENST00000561896 DHX38Q92620 1227 aaKnown RBP29.15■■■□□ 2.26
MSLN-203ENST00000561896 SLC4A7Q9Y6M7 1214 aa29.15■■■□□ 2.26
MSLN-203ENST00000561896 HOXC8P31273 242 aa29.14■■■□□ 2.26
MSLN-203ENST00000561896 ADD1P35611 737 aaKnown RBP29.14■■■□□ 2.26
MSLN-203ENST00000561896 ADCY7P51828 1080 aa29.14■■■□□ 2.26
MSLN-203ENST00000561896 DEFB128Q7Z7B8 93 aa29.14■■■□□ 2.26
MSLN-203ENST00000561896 NAP1L2Q9ULW6 460 aaPredicted RBP29.14■■■□□ 2.26
MSLN-203ENST00000561896 GBF1Q92538 1859 aa29.14■■■□□ 2.26
MSLN-203ENST00000561896 KAT6AQ92794 2004 aa29.13■■■□□ 2.25
MSLN-203ENST00000561896 KCNA2P16389 499 aa29.13■■■□□ 2.25
MSLN-203ENST00000561896 MTMR1Q13613 665 aa29.13■■■□□ 2.25
MSLN-203ENST00000561896 PFKFB3Q16875 520 aaPredicted RBP29.13■■■□□ 2.25
MSLN-203ENST00000561896 ZNF576Q9H609 170 aa29.13■■■□□ 2.25
MSLN-203ENST00000561896 JADE2Q9NQC1 790 aa29.13■■■□□ 2.25
MSLN-203ENST00000561896 MSRAQ9UJ68 235 aa29.13■■■□□ 2.25
MSLN-203ENST00000561896 SMCO2A6NFE2 343 aa29.12■■■□□ 2.25
MSLN-203ENST00000561896 GRXCR1A8MXD5 290 aa29.12■■■□□ 2.25
MSLN-203ENST00000561896 CKBP12277 381 aa29.12■■■□□ 2.25
MSLN-203ENST00000561896 AP3B2Q13367 1082 aa29.12■■■□□ 2.25
MSLN-203ENST00000561896 LRRC8DQ7L1W4 858 aa29.12■■■□□ 2.25
MSLN-203ENST00000561896 ZSWIM6Q9HCJ5 1215 aa29.12■■■□□ 2.25
MSLN-203ENST00000561896 ZNF215Q9UL58 517 aaPredicted RBP29.12■■■□□ 2.25
MSLN-203ENST00000561896 CHD9Q3L8U1 2897 aa29.12■■■□□ 2.25
MSLN-203ENST00000561896 BAIAP3O94812 1187 aa29.11■■■□□ 2.25
MSLN-203ENST00000561896 TRIM71Q2Q1W2 868 aaKnown RBP29.11■■■□□ 2.25
MSLN-203ENST00000561896 RUFY3Q7L099 469 aa29.11■■■□□ 2.25
MSLN-203ENST00000561896 SERINC5Q86VE9 423 aa29.11■■■□□ 2.25
MSLN-203ENST00000561896 TM6SF1Q9BZW5 370 aa29.11■■■□□ 2.25
MSLN-203ENST00000561896 ESYT2A0FGR8 921 aa29.1■■■□□ 2.25
MSLN-203ENST00000561896 C17orf102A2RUQ5 167 aa29.1■■■□□ 2.25
MSLN-203ENST00000561896 PRPF3O43395 683 aaKnown RBP29.1■■■□□ 2.25
MSLN-203ENST00000561896 ATP9AO75110 1047 aa29.1■■■□□ 2.25
MSLN-203ENST00000561896 SCG2P13521 617 aa29.1■■■□□ 2.25
MSLN-203ENST00000561896 PBX2P40425 430 aa29.1■■■□□ 2.25
MSLN-203ENST00000561896 CLK2P49760 499 aaKnown RBP29.1■■■□□ 2.25
MSLN-203ENST00000561896 PHOSPHO2Q8TCD6 241 aa29.1■■■□□ 2.25
MSLN-203ENST00000561896 ZBBXA8MT70 800 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 CXCL10P02778 98 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 SMIM10L2AP0DMW4 78 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 SMIM10L2BP0DMW5 78 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 GNAT1P11488 350 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 HIC1Q14526 733 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 MCTP2Q6DN12 878 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 CCDC12Q8WUD4 166 aaPredicted RBP29.09■■■□□ 2.25
MSLN-203ENST00000561896 SLC9A7Q96T83 725 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 MXRA8Q9BRK3 442 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 ANO3Q9BYT9 981 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 FTOQ9C0B1 505 aaKnown RBP eCLIP29.09■■■□□ 2.25
MSLN-203ENST00000561896 PCDHA11Q9Y5I1 949 aa29.09■■■□□ 2.25
MSLN-203ENST00000561896 A0A0C4DFX4 3053 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 ATP2A2P16615 1042 aaKnown RBP29.08■■■□□ 2.25
MSLN-203ENST00000561896 SREBF1P36956 1147 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 ZNF200P98182 395 aaPredicted RBP29.08■■■□□ 2.25
MSLN-203ENST00000561896 GPNMBQ14956 572 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 SLC17A8Q8NDX2 589 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 SEPT1Q8WYJ6 367 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 ATP6V0A1Q93050 837 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 ZMYND12Q9H0C1 365 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 CYP46A1Q9Y6A2 500 aa29.08■■■□□ 2.25
MSLN-203ENST00000561896 CAND2O75155 1236 aa29.07■■■□□ 2.24
MSLN-203ENST00000561896 GRIN2CQ14957 1233 aa29.07■■■□□ 2.24
MSLN-203ENST00000561896 NTRK3Q16288 839 aa29.07■■■□□ 2.24
MSLN-203ENST00000561896 CEP55Q53EZ4 464 aa29.07■■■□□ 2.24
MSLN-203ENST00000561896 RNF26Q9BY78 433 aaPredicted RBP29.07■■■□□ 2.24
MSLN-203ENST00000561896 RNPEPQ9H4A4 650 aa29.07■■■□□ 2.24
MSLN-203ENST00000561896 KCNH7Q9NS40 1196 aa29.07■■■□□ 2.24
MSLN-203ENST00000561896 IFNAR1P17181 557 aa29.06■■■□□ 2.24
MSLN-203ENST00000561896 PDIA3P30101 505 aaKnown RBP29.06■■■□□ 2.24
MSLN-203ENST00000561896 TCF7P36402 384 aaPredicted RBP29.06■■■□□ 2.24
MSLN-203ENST00000561896 PKN1Q16512 942 aa29.06■■■□□ 2.24
MSLN-203ENST00000561896 TRAF7Q6Q0C0 670 aa29.06■■■□□ 2.24
MSLN-203ENST00000561896 MYLIPQ8WY64 445 aa29.06■■■□□ 2.24
MSLN-203ENST00000561896 WNT8BQ93098 351 aa29.06■■■□□ 2.24
MSLN-203ENST00000561896 NFASCO94856 1347 aa29.05■■■□□ 2.24
MSLN-203ENST00000561896 EMSYQ7Z589 1322 aa29.05■■■□□ 2.24
MSLN-203ENST00000561896 AKAP17AQ02040 695 aaKnown RBP29.05■■■□□ 2.24
MSLN-203ENST00000561896 ZNF618Q5T7W0 954 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms