RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ST8SIA5O15466 376 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 FOSP01100 380 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-210ENST00000561817 CYP3A4P08684 503 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 VCAM1P19320 739 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 MMP16P51512 607 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 BACE1P56817 501 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 PDIA5Q14554 519 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 KARSQ15046 597 aaKnown RBP7.37□□□□□ -1.23
CAPN3-210ENST00000561817 ZYXQ15942 572 aaKnown RBP7.37□□□□□ -1.23
CAPN3-210ENST00000561817 CALCRLQ16602 461 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 USH1GQ495M9 461 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 Q4G0T1 1027 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 HS1BP3Q53T59 392 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 DLK2Q6UY11 383 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 LDHDQ86WU2 507 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 PLA2G4DQ86XP0 818 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 CEP57L1Q8IYX8 460 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 TRIML1Q8N9V2 468 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 IQUBQ8NA54 791 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 SMC1BQ8NDV3 1235 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 REPS2Q8NFH8 660 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.37□□□□□ -1.23
CAPN3-210ENST00000561817 ETNPPLQ8TBG4 499 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 CLEC4DQ8WXI8 215 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 ZKSCAN4Q969J2 545 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-210ENST00000561817 HOOK2Q96ED9 719 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 USB1Q9BQ65 265 aaKnown RBP7.37□□□□□ -1.23
CAPN3-210ENST00000561817 PYM1Q9BRP8 204 aaKnown RBP7.37□□□□□ -1.23
CAPN3-210ENST00000561817 SLC38A10Q9HBR0 1119 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 AAASQ9NRG9 546 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 DISC1Q9NRI5 854 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 KBTBD4Q9NVX7 518 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 TOR4AQ9NXH8 423 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 ADAMTS5Q9UNA0 930 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 FZD1Q9UP38 647 aa7.37□□□□□ -1.23
CAPN3-210ENST00000561817 ABCB11O95342 1321 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 IGLV3-22A0A075B6J6 115 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 ADM5C9JUS6 153 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 IKBKBO14920 756 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 KLRC4O43908 158 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 TOMM70O94826 608 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 ICAM1P05362 532 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 CASP1P29466 404 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 HSD17B4P51659 736 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 ZNF75DP51815 510 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 ARHGAP4P98171 946 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 SPIRE1Q08AE8 756 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 TRAF1Q13077 416 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 SPP2Q13103 211 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 IKQ13123 557 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 GRB10Q13322 594 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 MTMR2Q13614 643 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 CUL4BQ13620 913 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 TMEM119Q4V9L6 283 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 SH3D19Q5HYK7 790 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 HYIQ5T013 277 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 ISM2Q6H9L7 571 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 CCDC174Q6PII3 467 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 USP50Q70EL3 339 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 PNMA8AQ86V59 439 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 AOPEPQ8N6M6 819 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 PRPF38AQ8NAV1 312 aaKnown RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 ZNF280CQ8ND82 737 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 SMARCE1Q969G3 411 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 KIFC2Q96AC6 838 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 DCPSQ96C86 337 aaKnown RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 MRRFQ96E11 262 aaKnown RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 WRNIP1Q96S55 665 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 NAP1L4Q99733 375 aaKnown RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 NUDT12Q9BQG2 462 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 SLF1Q9BQI6 1058 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 BLOC1S4Q9NUP1 217 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 DDX25Q9UHL0 483 aaKnown RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 HOOK1Q9UJC3 728 aaKnown RBP7.36□□□□□ -1.23
CAPN3-210ENST00000561817 PPP1R9AQ9ULJ8 1098 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 AFG3L2Q9Y4W6 797 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 SNCAIPQ9Y6H5 919 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 PTPRFP10586 1907 aa7.36□□□□□ -1.23
CAPN3-210ENST00000561817 FRMPD4Q14CM0 1322 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 RPTORQ8N122 1335 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 FAM86B1E9PN63 330 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 TRAF5O00463 557 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 TBX3O15119 743 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 AVPP01185 164 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 FAM86B2P0C5J1 330 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 PLCG1P19174 1290 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 HOXA13P31271 388 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-210ENST00000561817 TECP42680 631 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 TXKP42681 527 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 AFMP43652 599 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 USP14P54578 494 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 FMR1Q06787 632 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAPN3-210ENST00000561817 GRM1Q13255 1194 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 ECM1Q16610 540 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 SUPT20HL1Q3ZLR7 823 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 CT47A1Q5JQC4 288 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-210ENST00000561817 CNNM4Q6P4Q7 775 aa7.35□□□□□ -1.23
CAPN3-210ENST00000561817 CABP7Q86V35 215 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms