RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
NEIL1-202ENST00000561643 PSTPIP2Q9H939 334 aa12.12□□□□□ -0.47
NEIL1-202ENST00000561643 PCDHA12Q9UN75 941 aa12.12□□□□□ -0.47
NEIL1-202ENST00000561643 CAPN6Q9Y6Q1 641 aa12.12□□□□□ -0.47
NEIL1-202ENST00000561643 TARSL2A2RTX5 802 aaKnown RBP12.11□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L10C9JJH3 530 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 TRAF5O00463 557 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 MOCS3O95396 460 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 SCNN1DP51172 638 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 C2orf54Q08AI8 447 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 COASYQ13057 564 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 ECM1Q16610 540 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 FAM71BQ8TC56 605 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 SWAP70Q9UH65 585 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 HNRNPH1P31943 449 aaKnown RBP12.11□□□□□ -0.47
NEIL1-202ENST00000561643 TDRD12Q587J7 1177 aaKnown RBP12.11□□□□□ -0.47
NEIL1-202ENST00000561643 FAM26FQ5R3K3 315 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
NEIL1-202ENST00000561643 HAS1Q92839 578 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 GDAP1L1Q96MZ0 367 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
NEIL1-202ENST00000561643 PPEF1O14829 653 aaPredicted RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 ZBTB5O15062 677 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 RNF40O75150 1001 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 MAGEA1P43355 309 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 CRAMP1Q96RY5 1269 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 MED4Q9NPJ6 270 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 COL4A3BPQ9Y5P4 624 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 SHMT1P34896 483 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 EHHADHQ08426 723 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 HOMEZQ8IX15 550 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 GSPT2Q8IYD1 628 aaKnown RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 PROM2Q8N271 834 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 NLRC4Q9NPP4 1024 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 CCT5P48643 541 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
NEIL1-202ENST00000561643 PDXDC1Q6P996 788 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 NELFCDQ8IXH7 590 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 CERS5Q8N5B7 392 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 BAP1Q92560 729 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 DNAJC19Q96DA6 116 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 PSMB7Q99436 277 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 NT5C3AQ9H0P0 336 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 KIAA1024Q9UPX6 916 aa12.1□□□□□ -0.47
NEIL1-202ENST00000561643 KDM3AQ9Y4C1 1321 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 E9PMD0 336 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 NAP1L1P55209 391 aaKnown RBP12.09□□□□□ -0.47
NEIL1-202ENST00000561643 DDR1Q08345 913 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 SEPT2Q15019 361 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 AFAP1L1Q8TED9 768 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 FBXO41Q8TF61 875 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 HINFPQ9BQA5 517 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 SUGT1Q9Y2Z0 365 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 G3V3G9 751 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 KRT18P05783 430 aaKnown RBP12.09□□□□□ -0.47
NEIL1-202ENST00000561643 RXRBP28702 533 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
NEIL1-202ENST00000561643 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 CCDC181Q5TID7 509 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 CREG2Q8IUH2 290 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 CCDC65Q8IXS2 484 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 COG1Q8WTW3 980 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 RIN2Q8WYP3 895 aaPredicted RBP12.09□□□□□ -0.47
NEIL1-202ENST00000561643 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 SH3BP1Q9Y3L3 701 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 LY75O60449 1722 aa12.09□□□□□ -0.47
NEIL1-202ENST00000561643 LCA5LO95447 670 aa12.08□□□□□ -0.47
NEIL1-202ENST00000561643 SLURP2P0DP57 97 aa12.08□□□□□ -0.47
NEIL1-202ENST00000561643 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.47
NEIL1-202ENST00000561643 HERC4Q5GLZ8 1057 aaPredicted RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms