RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 USP2O75604 605 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 CAPNS1P04632 268 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 MYCLP1P12525 358 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 RAC2P15153 192 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 IBSPP21815 317 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 CNGA1P29973 690 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 FLT3P36888 993 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 LINC00310P59036 64 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 RPL11P62913 178 aaKnown RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 NTRK3Q16288 839 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 CT47A1Q5JQC4 288 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 DENND5AQ6IQ26 1287 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 STYK1Q6J9G0 422 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 BRAPQ7Z569 592 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 NINJ1Q92982 152 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 MFSD3Q96ES6 412 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 C1orf159Q96HA4 380 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 MMP19Q99542 508 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 EPB41L4BQ9H329 900 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 SLC52A2Q9HAB3 445 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 GPR27Q9NS67 375 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 TMEFF2Q9UIK5 374 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 PRKAB1Q9Y478 270 aa5.48□□□□□ -1.53
LRRC28-222ENST00000561431 TIMM13Q9Y5L4 95 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 ZNF644Q9H582 1327 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-222ENST00000561431 ADGBQ8N7X0 1667 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 WTIPA6NIX2 430 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-222ENST00000561431 RFPL3O75679 317 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 CRTAMO95727 393 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 ZGLP1P0C6A0 271 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 LCP1P13796 627 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 NEK4P51957 841 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 GPR85P60893 370 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 RBM10P98175 930 aaKnown RBP5.47□□□□□ -1.53
LRRC28-222ENST00000561431 CHRNEQ04844 493 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 CYP4F3Q08477 520 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 DALRD3Q5D0E6 543 aaKnown RBP5.47□□□□□ -1.53
LRRC28-222ENST00000561431 RSPO2Q6UXX9 243 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-222ENST00000561431 ZC3H7AQ8IWR0 971 aaKnown RBP5.47□□□□□ -1.53
LRRC28-222ENST00000561431 ANKS4BQ8N8V4 417 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 RCBTB1Q8NDN9 531 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 SLC7A14Q8TBB6 771 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 HHIPL1Q96JK4 782 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 CLUHP3Q96NS8 147 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 ZFYVE21Q9BQ24 234 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 PARD6AQ9NPB6 346 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 MAGEC2Q9UBF1 373 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-222ENST00000561431 CFDP1Q9UEE9 299 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-222ENST00000561431 PCDHA9Q9Y5H5 950 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 PCDHA8Q9Y5H6 950 aa5.47□□□□□ -1.53
LRRC28-222ENST00000561431 CCDC141Q6ZP82 1450 aa5.46□□□□□ -1.53
LRRC28-222ENST00000561431 LMTK3Q96Q04 1460 aa5.46□□□□□ -1.53
LRRC28-222ENST00000561431 A0A0G2JLL6 359 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 A0A1W2PQ45 241 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 A0A1W2PQY0 241 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 C7orf72A4D263 438 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 FOXD2O60548 495 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 C6orf222P0C671 652 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 SRGAP2CP0DJJ0 459 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 BCL6P41182 706 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 KIR2DL1P43626 348 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 KIR2DL2P43627 348 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 HNRNPMP52272 730 aaKnown RBP eCLIP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 GTF2A2P52657 109 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 ST5P78524 1137 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 LSAMPQ13449 338 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 INF2Q27J81 1249 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 KIZQ2M2Z5 673 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 GALNT18Q6P9A2 607 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 UBE2R2Q712K3 238 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 CCDC103Q8IW40 242 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 PDZD8Q8NEN9 1154 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 ZCRB1Q8TBF4 217 aaKnown RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 TRMT2BQ96GJ1 504 aaKnown RBP5.46□□□□□ -1.54
LRRC28-222ENST00000561431 TMEM169Q96HH4 297 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 IRF2BPLQ9H1B7 796 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 IFT57Q9NWB7 429 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 CLDND1Q9NY35 253 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 MARCH2Q9P0N8 246 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 GULP1Q9UBP9 304 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 GPR160Q9UJ42 338 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 MYOM3Q5VTT5 1437 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 MAST1Q9Y2H9 1570 aa5.46□□□□□ -1.54
LRRC28-222ENST00000561431 CROCC2H7BZ55 1655 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.45□□□□□ -1.54
LRRC28-222ENST00000561431 FITM1A5D6W6 292 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 FADS2P1A8MWK0 482 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 B4E1Z4 1266 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 RASGRP1O95267 797 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 FUCA1P04066 466 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 PAK1Q13153 545 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 LBX2Q6XYB7 198 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 EP400NLQ6ZTU2 488 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 CEP68Q76N32 757 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 LZTR1Q8N653 840 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 TMEM52Q8NDY8 209 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 NUP43Q8NFH3 380 aa5.45□□□□□ -1.54
LRRC28-222ENST00000561431 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.45□□□□□ -1.54
LRRC28-222ENST00000561431 LINC01599Q8WXQ3 324 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms