RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 CUL5Q93034 780 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 ASB2Q96Q27 587 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 COL4A4P53420 1690 aaPredicted RBP31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 CXCL10P02778 98 aa31.2■■■□□ 2.59
SNRPA1-215ENST00000561187 SRBD1Q8N5C6 995 aaKnown RBP31.2■■■□□ 2.59
SNRPA1-215ENST00000561187 INPP4AQ96PE3 977 aaPredicted RBP31.2■■■□□ 2.59
SNRPA1-215ENST00000561187 ESYT1Q9BSJ8 1104 aa31.2■■■□□ 2.59
SNRPA1-215ENST00000561187 MTUS1Q9ULD2 1270 aa31.2■■■□□ 2.59
SNRPA1-215ENST00000561187 C17orf102A2RUQ5 167 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 H3BRB1 525 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 GTPBP6O43824 516 aaPredicted RBP31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 SMIM10L2AP0DMW4 78 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 SMIM10L2BP0DMW5 78 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 MCM5P33992 734 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 MRPS5P82675 430 aaKnown RBP31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 TFF2Q03403 129 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 UTP14CQ5TAP6 766 aaKnown RBP31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 CCDC82Q8N4S0 544 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 ATP6V0A1Q93050 837 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 TUT1Q9H6E5 874 aaKnown RBP31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 ANO2Q9NQ90 1003 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 MTCH2Q9Y6C9 303 aa31.19■■■□□ 2.58
SNRPA1-215ENST00000561187 CTSHP09668 335 aa31.18■■■□□ 2.58
SNRPA1-215ENST00000561187 CREB3L3Q68CJ9 461 aa31.18■■■□□ 2.58
SNRPA1-215ENST00000561187 IL27Q8NEV9 243 aa31.18■■■□□ 2.58
SNRPA1-215ENST00000561187 ADAMTS19Q8TE59 1207 aa31.18■■■□□ 2.58
SNRPA1-215ENST00000561187 TREHO43280 583 aa31.17■■■□□ 2.58
SNRPA1-215ENST00000561187 FIBPO43427 364 aa31.17■■■□□ 2.58
SNRPA1-215ENST00000561187 SERINC5Q86VE9 423 aa31.17■■■□□ 2.58
SNRPA1-215ENST00000561187 GDPD5Q8WTR4 605 aa31.17■■■□□ 2.58
SNRPA1-215ENST00000561187 SPATA31C2B4DYI2 1134 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 MEIS2O14770 477 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 PARNO95453 639 aaKnown RBP31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 NEDD9Q14511 834 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 UBE2SQ16763 222 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 METTL7BQ6UX53 244 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 MAP3K14Q99558 947 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 GPR20Q99678 358 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 TSPYL2Q9H2G4 693 aaPredicted RBP31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 PKD2L1Q9P0L9 805 aa31.16■■■□□ 2.58
SNRPA1-215ENST00000561187 ICAM3P32942 547 aa31.15■■■□□ 2.58
SNRPA1-215ENST00000561187 GRB10Q13322 594 aa31.15■■■□□ 2.58
SNRPA1-215ENST00000561187 IKBKEQ14164 716 aa31.15■■■□□ 2.58
SNRPA1-215ENST00000561187 MICU3Q86XE3 530 aa31.15■■■□□ 2.58
SNRPA1-215ENST00000561187 TMEM87BQ96K49 555 aa31.15■■■□□ 2.58
SNRPA1-215ENST00000561187 TCF20Q9UGU0 1960 aaKnown RBP31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 ABHD14A-ACY1A0A1B0GW23 586 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 RSPH10B2B2RC85 870 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 TNFRSF10AO00220 468 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 LGR5O75473 907 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 STAM2O75886 525 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 RSPH10BP0C881 870 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 PCNX4Q63HM2 1172 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 LZTS2Q9BRK4 669 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 RNPEPQ9H4A4 650 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 SETD4Q9NVD3 440 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 SLC12A7Q9Y666 1083 aa31.14■■■□□ 2.58
SNRPA1-215ENST00000561187 GJB5O95377 273 aa31.13■■■□□ 2.57
SNRPA1-215ENST00000561187 GNAQP50148 359 aa31.13■■■□□ 2.57
SNRPA1-215ENST00000561187 DBF4BQ8NFT6 615 aa31.13■■■□□ 2.57
SNRPA1-215ENST00000561187 NECAB3Q96P71 396 aaPredicted RBP31.13■■■□□ 2.57
SNRPA1-215ENST00000561187 UHRF1Q96T88 793 aaPredicted RBP31.13■■■□□ 2.57
SNRPA1-215ENST00000561187 OSBPL7Q9BZF2 842 aa31.13■■■□□ 2.57
SNRPA1-215ENST00000561187 MYOCDQ8IZQ8 938 aa31.12■■■□□ 2.57
SNRPA1-215ENST00000561187 TCEANC2Q96MN5 208 aa31.12■■■□□ 2.57
SNRPA1-215ENST00000561187 USP26Q9BXU7 913 aa31.12■■■□□ 2.57
SNRPA1-215ENST00000561187 MICAL3Q7RTP6 2002 aa31.12■■■□□ 2.57
SNRPA1-215ENST00000561187 PIK3CDO00329 1044 aa31.11■■■□□ 2.57
SNRPA1-215ENST00000561187 KCNQ1P51787 676 aa31.11■■■□□ 2.57
SNRPA1-215ENST00000561187 HEATR3Q7Z4Q2 680 aa31.11■■■□□ 2.57
SNRPA1-215ENST00000561187 PSTPIP2Q9H939 334 aa31.11■■■□□ 2.57
SNRPA1-215ENST00000561187 EMSYQ7Z589 1322 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 LPXNO60711 386 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 ARHGAP4P98171 946 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 NECTIN1Q15223 517 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 TMTC3Q6ZXV5 915 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 NLRX1Q86UT6 975 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 TMTC2Q8N394 836 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 RAD9AQ99638 391 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 MTA3Q9BTC8 594 aa31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 ZNF215Q9UL58 517 aaPredicted RBP31.1■■■□□ 2.57
SNRPA1-215ENST00000561187 CALM1P0DP23 149 aa31.09■■■□□ 2.57
SNRPA1-215ENST00000561187 CALM2P0DP24 149 aa31.09■■■□□ 2.57
SNRPA1-215ENST00000561187 CALM3P0DP25 149 aa31.09■■■□□ 2.57
SNRPA1-215ENST00000561187 SMARCA1P28370 1054 aa31.09■■■□□ 2.57
SNRPA1-215ENST00000561187 HOXC8P31273 242 aa31.09■■■□□ 2.57
SNRPA1-215ENST00000561187 LIFRP42702 1097 aa31.09■■■□□ 2.57
SNRPA1-215ENST00000561187 LINC01553A4QN01 128 aa31.08■■■□□ 2.57
SNRPA1-215ENST00000561187 EFCAB14O75071 495 aa31.08■■■□□ 2.57
SNRPA1-215ENST00000561187 ATP9AO75110 1047 aa31.08■■■□□ 2.57
SNRPA1-215ENST00000561187 MARK3P27448 753 aa31.08■■■□□ 2.57
SNRPA1-215ENST00000561187 LMBR1Q8WVP7 490 aa31.08■■■□□ 2.57
SNRPA1-215ENST00000561187 NCOR1O75376 2440 aa31.08■■■□□ 2.57
SNRPA1-215ENST00000561187 TCF7P36402 384 aaPredicted RBP31.07■■■□□ 2.56
SNRPA1-215ENST00000561187 FANCBQ8NB91 859 aa31.07■■■□□ 2.56
SNRPA1-215ENST00000561187 SPDYE3A6NKU9 549 aa31.06■■■□□ 2.56
SNRPA1-215ENST00000561187 AMHP03971 560 aa31.06■■■□□ 2.56
SNRPA1-215ENST00000561187 ITGB5P18084 799 aa31.06■■■□□ 2.56
SNRPA1-215ENST00000561187 POU3F3P20264 500 aaPredicted RBP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms