RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 DGKDQ16760 1214 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 UBE2SQ16763 222 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 CELF3Q5SZQ8 465 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 DHX37Q8IY37 1157 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 CCDC155Q8N6L0 562 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 ZNF274Q96GC6 653 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 KATNAL1Q9BW62 490 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 GLT8D2Q9H1C3 349 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 SLC4A7Q9Y6M7 1214 aa17.41■□□□□ 0.38
SNRPA1-210ENST00000560383 FIBPO43427 364 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 SCG2P13521 617 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 PKN1Q16512 942 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 CAGE1Q8TC20 777 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 KAT2BQ92831 832 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 ZFP91Q96JP5 570 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 GAS2L1Q99501 681 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 RNF26Q9BY78 433 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 PCDHA6Q9UN73 950 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 NOD1Q9Y239 953 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 PCDHA8Q9Y5H6 950 aa17.4■□□□□ 0.38
SNRPA1-210ENST00000560383 REV3LO60673 3130 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 ESYT2A0FGR8 921 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 SMCO2A6NFE2 343 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 SPDYE3A6NKU9 549 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 PPFIA4O75335 1185 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 GGPS1O95749 300 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 F2P00734 622 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 FOSP01100 380 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 IQCF3P0C7M6 154 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 ACTN1P12814 892 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 RBL2Q08999 1139 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 RETREG2Q8NC44 543 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 AFAP1L1Q8TED9 768 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 SENP7Q9BQF6 1050 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 PDRG1Q9NUG6 133 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 RTEL1Q9NZ71 1219 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 PCDHA11Q9Y5I1 949 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 MUC3AQ02505 3323 aa17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 TRIP12Q14669 1992 aaPredicted RBP17.39■□□□□ 0.37
SNRPA1-210ENST00000560383 PARNO95453 639 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 ATP2A2P16615 1042 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 ADCY7P51828 1080 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 NEDD9Q14511 834 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 PTGISQ16647 500 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 HSDL1Q3SXM5 330 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 GPRASP2Q96D09 838 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 CTAGE1Q96RT6 745 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 COL25A1Q9BXS0 654 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 ZMYND12Q9H0C1 365 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 SLC28A3Q9HAS3 691 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 NCOA5Q9HCD5 579 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 GTF2IRD1Q9UHL9 959 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 UBIAD1Q9Y5Z9 338 aa17.38■□□□□ 0.37
SNRPA1-210ENST00000560383 ZBBXA8MT70 800 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 HAS3O00219 553 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 BAIAP3O94812 1187 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 SEC24BO95487 1268 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 ITGB5P18084 799 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 CCT2P78371 535 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 AP3B2Q13367 1082 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 GDF6Q6KF10 455 aaPredicted RBP17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 METTL7BQ6UX53 244 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 DEFB128Q7Z7B8 93 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 NLRX1Q86UT6 975 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 PHKBQ93100 1093 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 CDHR1Q96JP9 859 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 SPATA33Q96N06 139 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 SLC9A7Q96T83 725 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 NKX2-4Q9H2Z4 354 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 EHMT1Q9H9B1 1298 aa17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 YBX2Q9Y2T7 364 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-210ENST00000560383 TET1Q8NFU7 2136 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 MYO9BQ13459 2157 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 MAFGO15525 162 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 PSEN2P49810 448 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 AKAP17AQ02040 695 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 PHOSPHO2Q8TCD6 241 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 PPP1R13LQ8WUF5 828 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 PRDM12Q9H4Q4 367 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 MLXIPQ9HAP2 919 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 XIRP2A4UGR9 3374 aa17.36■□□□□ 0.37
SNRPA1-210ENST00000560383 PTPRSQ13332 1948 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 SREBF1P36956 1147 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 MFSD10Q14728 455 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 KIAA0753Q2KHM9 967 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 PPP2R2DQ66LE6 453 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 MCTP2Q6DN12 878 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 GIMAP8Q8ND71 665 aaPredicted RBP17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 CRYGNQ8WXF5 182 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 C16orf70Q9BSU1 422 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 SLC26A6Q9BXS9 759 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 ANO3Q9BYT9 981 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 JADE2Q9NQC1 790 aa17.35■□□□□ 0.37
SNRPA1-210ENST00000560383 ZNF286BP0CG31 522 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 SELPP16109 830 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms