RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 KARSQ15046 597 aaKnown RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 WLSQ5T9L3 541 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 CCDC70Q6NSX1 233 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 KCNV1Q6PIU1 500 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 STOX1Q6ZVD7 989 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 TRAPPC11Q7Z392 1133 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 KRT25Q7Z3Z0 450 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 MCF2L2Q86YR7 1114 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 FMNL3Q8IVF7 1028 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 SLC35F6Q8N357 371 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 IL17REQ8NFR9 667 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 KAT2BQ92831 832 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 ZBTB9Q96C00 473 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 SH3GL2Q99962 352 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 CAPS2Q9BXY5 557 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 SIL1Q9H173 461 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 BOLA2Q9H3K6 86 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 HAUS4Q9H6D7 363 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 ACTR5Q9H9F9 607 aaPredicted RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 GPR108Q9NPR9 543 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 KBTBD4Q9NVX7 518 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 KANSL3Q9P2N6 904 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 PUF60Q9UHX1 559 aaKnown RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 MCM8Q9UJA3 840 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 UBR1Q8IWV7 1749 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 STK36Q9NRP7 1315 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 LAMB4A4D0S4 1761 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 CPDO75976 1380 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 METP08581 1390 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 NID2Q14112 1375 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 ABCC12Q96J65 1359 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 GOLGA6CA6NDK9 693 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 E7EWF7 191 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 GOLIM4O00461 696 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 SSBP05455 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 GOLGA6DP0CG33 693 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 SPATA31C1P0DKV0 1188 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 ELF1P32519 619 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 MRPL12P52815 198 aaKnown RBP6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 FCGRTP55899 365 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 IFFO1Q0D2I5 559 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 PTPAQ15257 358 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 CCDC85BQ15834 202 aaPredicted RBP6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 HSP90AB3PQ58FF7 597 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 SOGA3Q5TF21 947 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 SPATA1Q5VX52 437 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 PAPD7Q5XG87 772 aaKnown RBP6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 ALS2CLQ60I27 953 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 CPLX2Q6PUV4 134 aaKnown RBP6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 CYP26C1Q6V0L0 522 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 RAD9BQ6WBX8 426 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 ANKRD18AQ8IVF6 992 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 PDILTQ8N807 584 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 SPATA20Q8TB22 786 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 P3H4Q92791 437 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 SUCLG2Q96I99 432 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 SPON2Q9BUD6 331 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 CCDC8Q9H0W5 538 aaPredicted RBP6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 CHRDQ9H2X0 955 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 RUBCNLQ9H714 662 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 BRD7Q9NPI1 651 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 CHPF2Q9P2E5 772 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 MAN1B1Q9UKM7 699 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 FAM184BQ9ULE4 1060 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 NFE2L3Q9Y4A8 694 aa6.65□□□□□ -1.34
SNRPA1-209ENST00000560307 GRIN2DO15399 1336 aa6.65□□□□□ -1.35
SNRPA1-209ENST00000560307 ZMYM6O95789 1325 aa6.65□□□□□ -1.35
SNRPA1-209ENST00000560307 ARFGEF2Q9Y6D5 1785 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 CCDC189A1A4V9 331 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 GOLGA6BA6NDN3 693 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 MEFVO15553 781 aaPredicted RBP6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 DTNBO60941 627 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 RHOXF2BP0C7M4 288 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 GCFC2P16383 781 aaKnown RBP6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 ATF4P18848 351 aaPredicted RBP6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 GBP2P32456 591 aaPredicted RBP6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 CCT5P48643 541 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 LIG3P49916 1009 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 ADKP55263 362 aaKnown RBP6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 MLECQ14165 292 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 POSTNQ15063 836 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 TNNI3KQ59H18 835 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 TTC39AQ5SRH9 613 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 CDKAL1Q5VV42 579 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 SHC4Q6S5L8 630 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 APTXQ7Z2E3 356 aaKnown RBP6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 PGBD3Q8N328 593 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 MMGT1Q8N4V1 131 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 OTUD6BQ8N6M0 293 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 BCAS4Q8TDM0 211 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 AENQ8WTP8 325 aaKnown RBP6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 CAVIN3Q969G5 261 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 PMEPA1Q969W9 287 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 MAP3K14Q99558 947 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 RHOXF2Q9BQY4 288 aa6.64□□□□□ -1.35
SNRPA1-209ENST00000560307 TEX13AQ9BXU3 409 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms