RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 KCNA2P16389 499 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 SYT1P21579 422 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 SFNP31947 248 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 RGS19P49795 217 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 SLC26A2P50443 739 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 ACLYP53396 1101 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 GUCY1B3Q02153 619 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 KCNA10Q16322 511 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 PRR16Q569H4 304 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 C1orf53Q5VUE5 145 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 MCTP1Q6DN14 999 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 CCSAPQ6IQ19 270 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 SEPT1Q8WYJ6 367 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 JPH1Q9HDC5 661 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 SLC9A2Q9UBY0 812 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 SCN10AQ9Y5Y9 1956 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 CENPFP49454 3210 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 STX6O43752 255 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 ARIH2O95376 493 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 ASGR1P07306 291 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 MMP3P08254 477 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 COL6A1P12109 1028 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 EN2P19622 333 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 ANO1Q5XXA6 986 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 CYFIP1Q7L576 1253 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 ZNF215Q9UL58 517 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 STK24Q9Y6E0 443 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
RABGGTA-215ENST00000560207 CTAGE5O15320 804 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 ADCY6O43306 1168 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 NEMFO60524 1076 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 GAS7O60861 476 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 ARP10275 920 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 JAK3P52333 1124 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 SOX10P56693 466 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 SP2Q02086 613 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 SEMA3FQ13275 785 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 GJC2Q5T442 439 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 UBE2Q1Q7Z7E8 422 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 CYP2W1Q8TAV3 490 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 AFG1LQ8WV93 481 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 LENG9Q96B70 501 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 PAWRQ96IZ0 340 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 TEKT3Q9BXF9 490 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 RAB34Q9BZG1 259 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 CEP131Q9UPN4 1083 aa13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 DDX49Q9Y6V7 483 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-215ENST00000560207 LOXHD1Q8IVV2 1947 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 WDR64B1ANS9 1081 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 ADAMTS3O15072 1205 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 MSH4O15457 936 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 ATP9AO75110 1047 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 FOSBP53539 338 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 PURAQ00577 322 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 CALCRLQ16602 461 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 LRCH2Q5VUJ6 765 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 FAM160B1Q5W0V3 765 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 ATL3Q6DD88 541 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 MIS18BP1Q6P0N0 1132 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 GPR20Q99678 358 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 SMARCAD1Q9H4L7 1026 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 AZI2Q9H6S1 392 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 KCNMB3Q9NPA1 279 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 PCDHA10Q9Y5I2 948 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 ATP6V1DQ9Y5K8 247 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 EMSYQ7Z589 1322 aa13.62□□□□□ -0.23
RABGGTA-215ENST00000560207 A0A1W2PQ45 241 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 A0A1W2PQY0 241 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 DHX15O43143 795 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 ATG7O95352 703 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 TDP2O95551 362 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 PSAPP07602 524 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 TMEM266Q2M3C6 531 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 NFRKBQ6P4R8 1299 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 PLPPR4Q7Z2D5 763 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 ETNPPLQ8TBG4 499 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 COPS5Q92905 334 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 VTI1AQ96AJ9 217 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 TOX2Q96NM4 488 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 SENP6Q9GZR1 1112 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 ERAP1Q9NZ08 941 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
RABGGTA-215ENST00000560207 H3BRB1 525 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 TLR3O15455 904 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 PSMD10O75832 226 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 F2P00734 622 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms