RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 MB21D1Q8N884 522 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 OTUD5Q96G74 571 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 ZNF830Q96NB3 372 aaPredicted RBP14.17□□□□□ -0.14
USP3-213ENST00000559711 NAP1L5Q96NT1 182 aaPredicted RBP14.17□□□□□ -0.14
USP3-213ENST00000559711 TUFT1Q9NNX1 390 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 PXMP2Q9NR77 195 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 KCNH7Q9NS40 1196 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
USP3-213ENST00000559711 IMPACTQ9P2X3 320 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 DNM3Q9UQ16 869 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 UNCXA6NJT0 531 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 PSMA7O14818 248 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 PTGS1P23219 599 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 TTLL12Q14166 644 aaPredicted RBP14.17□□□□□ -0.14
USP3-213ENST00000559711 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 DYMQ7RTS9 669 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 APTXQ7Z2E3 356 aaKnown RBP14.17□□□□□ -0.14
USP3-213ENST00000559711 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
USP3-213ENST00000559711 ZFP91Q96JP5 570 aaPredicted RBP14.17□□□□□ -0.14
USP3-213ENST00000559711 TEKT3Q9BXF9 490 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 KCNF1Q9H3M0 494 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 MAPK8IP1Q9UQF2 711 aa14.17□□□□□ -0.14
USP3-213ENST00000559711 LRRC10BA6NIK2 292 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 DHX15O43143 795 aaKnown RBP14.16□□□□□ -0.14
USP3-213ENST00000559711 SLITRK3O94933 977 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 FCER1AP12319 257 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 CYP11B2P19099 503 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 EIF2AK2P19525 551 aaKnown RBP14.16□□□□□ -0.14
USP3-213ENST00000559711 PSMC6P62333 389 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 EPHA7Q15375 998 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 ARHGEF16Q5VV41 709 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 GADL1Q6ZQY3 521 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 VSIG10LQ86VR7 867 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 KIAA0895Q8NCT3 520 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 CHST13Q8NET6 341 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 UNC45AQ9H3U1 944 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 AGO4Q9HCK5 861 aaKnown RBP14.16□□□□□ -0.14
USP3-213ENST00000559711 CYP39A1Q9NYL5 469 aa14.16□□□□□ -0.14
USP3-213ENST00000559711 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
USP3-213ENST00000559711 SCN4AP35499 1836 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 PARP14Q460N5 1801 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 A0A1B0GTH6 734 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 ZNF500O60304 480 aaPredicted RBP14.15□□□□□ -0.14
USP3-213ENST00000559711 CCNE1P24864 410 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 CLCN1P35523 988 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 MOGSQ13724 837 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 TPD52L1Q16890 204 aaPredicted RBP14.15□□□□□ -0.14
USP3-213ENST00000559711 HSP90AA4PQ58FG1 418 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 ARSHQ5FYA8 562 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 GPBP1Q86WP2 473 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 NSUN6Q8TEA1 469 aaKnown RBP14.15□□□□□ -0.14
USP3-213ENST00000559711 PURBQ96QR8 312 aaKnown RBP14.15□□□□□ -0.14
USP3-213ENST00000559711 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 A1CFQ9NQ94 594 aaKnown RBP14.15□□□□□ -0.14
USP3-213ENST00000559711 INTS13Q9NVM9 706 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 RGL1Q9NZL6 768 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 AGTPBP1Q9UPW5 1226 aa14.15□□□□□ -0.14
USP3-213ENST00000559711 WDR90Q96KV7 1748 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 FRMD3A2A2Y4 597 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 EYA4O95677 639 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 SSBP05455 408 aaKnown RBP eCLIP14.14□□□□□ -0.15
USP3-213ENST00000559711 NR3C2P08235 984 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 PMS1P54277 932 aaKnown RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 GSDMDP57764 484 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 SPAG1Q07617 926 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 MTMR1Q13613 665 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 PLS1Q14651 629 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 NR1I3Q14994 352 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 TTI2Q6NXR4 508 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 RIOX2Q8IUF8 465 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 VSTM4Q8IW00 320 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 GUF1Q8N442 669 aaKnown RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 OPTNQ96CV9 577 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 DYDC2Q96IM9 177 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 SLC39A2Q9NP94 309 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 TBC1D22BQ9NU19 505 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 BTBD7Q9P203 1132 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 LIMA1Q9UHB6 759 aaKnown RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 BICDL2A1A5D9 508 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 MAFGO15525 162 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 COBLO75128 1261 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 IDEP14735 1019 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 CCND2P30279 289 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 CYP4A11Q02928 519 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 COASYQ13057 564 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 CENPPQ6IPU0 288 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 FOXR2Q6PJQ5 311 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 FASTKD5Q7L8L6 764 aaKnown RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 TMC6Q7Z403 805 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 FILIP1Q7Z7B0 1213 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 IRF2BP1Q8IU81 584 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 CCDC65Q8IXS2 484 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 NEK9Q8TD19 979 aa14.14□□□□□ -0.15
USP3-213ENST00000559711 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
USP3-213ENST00000559711 CACTINQ8WUQ7 758 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms