RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 GNAT1P11488 350 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 SLC16A2P36021 539 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 TECP42680 631 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 CCDC105Q8IYK2 499 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 TMEM57Q8N5G2 664 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 KLHL23Q8NBE8 558 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 SPPL3Q8TCT6 385 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-211ENST00000559460 RTP3Q9BQQ7 232 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 DLL3Q9NYJ7 618 aa11.39□□□□□ -0.59
SMAD3-211ENST00000559460 GSG1L2A8MUP6 293 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 PER2O15055 1255 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 PPFIA3O75145 1194 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 LINC00271P0C7V0 271 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 GNAT2P19087 354 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 DNAJB1P25685 340 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 CAMK1Q14012 370 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-211ENST00000559460 SPOUT1Q5T280 376 aaKnown RBP11.38□□□□□ -0.59
SMAD3-211ENST00000559460 KIAA0319Q5VV43 1072 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 CES5AQ6NT32 575 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 FTSJ3Q8IY81 847 aaKnown RBP11.38□□□□□ -0.59
SMAD3-211ENST00000559460 CMTR2Q8IYT2 770 aaKnown RBP11.38□□□□□ -0.59
SMAD3-211ENST00000559460 NSUN6Q8TEA1 469 aaKnown RBP11.38□□□□□ -0.59
SMAD3-211ENST00000559460 RUBCNQ92622 972 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 KIF1BPQ96EK5 621 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 STRBPQ96SI9 672 aaKnown RBP11.38□□□□□ -0.59
SMAD3-211ENST00000559460 APOL5Q9BWW9 433 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 NACAP1Q9BZK3 213 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 DCHS1Q96JQ0 3298 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 CACNA1GO43497 2377 aa11.38□□□□□ -0.59
SMAD3-211ENST00000559460 RBAK-RBAKDNI3L0D1 243 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 STK25O00506 426 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 PPFIA4O75335 1185 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 AOC1P19801 751 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 COL9A2Q14055 689 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-211ENST00000559460 ARHGEF16Q5VV41 709 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 DTWD2Q8NBA8 298 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 CLEC4DQ8WXI8 215 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 ZNF689Q96CS4 500 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-211ENST00000559460 SPATA33Q96N06 139 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 NECTIN4Q96NY8 510 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 AAASQ9NRG9 546 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 FBXL21Q9UKT6 434 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 TNNQ9UQP3 1299 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 PCDHB12Q9Y5F1 795 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
SMAD3-211ENST00000559460 MYO7AQ13402 2215 aa11.37□□□□□ -0.59
SMAD3-211ENST00000559460 FRMPD2Q68DX3 1309 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-211ENST00000559460 CCDC171Q6TFL3 1326 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 TREHO43280 583 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 DGKIO75912 1065 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 CHGBP05060 677 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 STAG3L1P0CL83 205 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 SMIM10L2AP0DMW4 78 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 SMIM10L2BP0DMW5 78 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 GHRP10912 638 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 HOXB8P17481 243 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-211ENST00000559460 UBE3AQ05086 875 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 DUSP6Q16828 381 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 USH1GQ495M9 461 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 PAN2Q504Q3 1202 aaKnown RBP11.36□□□□□ -0.59
SMAD3-211ENST00000559460 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
SMAD3-211ENST00000559460 ANKRD54Q6NXT1 300 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 LLGL2Q6P1M3 1020 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 TDRD5Q8NAT2 981 aaKnown RBP11.36□□□□□ -0.59
SMAD3-211ENST00000559460 ATP8B4Q8TF62 1192 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 IWS1Q96ST2 819 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 RC3H2Q9HBD1 1191 aaKnown RBP11.36□□□□□ -0.59
SMAD3-211ENST00000559460 GPCPD1Q9NPB8 672 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 DDX41Q9UJV9 622 aaKnown RBP11.36□□□□□ -0.59
SMAD3-211ENST00000559460 R4GN57 208 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 MYO15AQ9UKN7 3530 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 GVINP1Q7Z2Y8 2422 aa11.36□□□□□ -0.59
SMAD3-211ENST00000559460 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 C2CD4DB7Z1M9 353 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 H3BRB1 525 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 SORBS3O60504 671 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 ATP5JP18859 108 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 RBM10P98175 930 aaKnown RBP11.35□□□□□ -0.59
SMAD3-211ENST00000559460 ZKSCAN2Q63HK3 967 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 CWF19L1Q69YN2 538 aaKnown RBP11.35□□□□□ -0.59
SMAD3-211ENST00000559460 TTBK2Q6IQ55 1244 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 KCNV1Q6PIU1 500 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 RASGRP2Q7LDG7 609 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 RSPH3Q86UC2 560 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 NAPBQ9H115 298 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
SMAD3-211ENST00000559460 MLXIPQ9HAP2 919 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 CDV3Q9UKY7 258 aaKnown RBP11.35□□□□□ -0.59
SMAD3-211ENST00000559460 LRFN2Q9ULH4 789 aa11.35□□□□□ -0.59
SMAD3-211ENST00000559460 EPG5Q9HCE0 2579 aa11.34□□□□□ -0.59
SMAD3-211ENST00000559460 NOP56O00567 594 aaKnown RBP11.34□□□□□ -0.59
SMAD3-211ENST00000559460 GPAA1O43292 621 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms