RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 PCDHA8Q9Y5H6 950 aa28.9■■■□□ 2.22
CRNDE-206ENST00000559432 V9GY48 417 aaPredicted RBP28.9■■■□□ 2.22
CRNDE-206ENST00000559432 CKBP12277 381 aa28.89■■■□□ 2.22
CRNDE-206ENST00000559432 PPP1R18Q6NYC8 613 aa28.89■■■□□ 2.22
CRNDE-206ENST00000559432 BLOC1S2Q6QNY1 142 aa28.89■■■□□ 2.22
CRNDE-206ENST00000559432 PCDHA11Q9Y5I1 949 aa28.89■■■□□ 2.22
CRNDE-206ENST00000559432 SNX14Q9Y5W7 946 aa28.89■■■□□ 2.22
CRNDE-206ENST00000559432 C17orf102A2RUQ5 167 aa28.88■■■□□ 2.21
CRNDE-206ENST00000559432 hCG_1984214I3L0E3 225 aa28.88■■■□□ 2.21
CRNDE-206ENST00000559432 CPA1P15085 419 aa28.88■■■□□ 2.21
CRNDE-206ENST00000559432 METAP2P50579 478 aaKnown RBP eCLIP28.88■■■□□ 2.21
CRNDE-206ENST00000559432 RABGGTBP53611 331 aa28.88■■■□□ 2.21
CRNDE-206ENST00000559432 ZNF200P98182 395 aaPredicted RBP28.88■■■□□ 2.21
CRNDE-206ENST00000559432 SP4Q02446 784 aa28.88■■■□□ 2.21
CRNDE-206ENST00000559432 Q6ZUG5 572 aa28.88■■■□□ 2.21
CRNDE-206ENST00000559432 ZNF713Q8N859 430 aaPredicted RBP28.88■■■□□ 2.21
CRNDE-206ENST00000559432 GAS2L1Q99501 681 aaPredicted RBP28.88■■■□□ 2.21
CRNDE-206ENST00000559432 ZNF215Q9UL58 517 aaPredicted RBP28.88■■■□□ 2.21
CRNDE-206ENST00000559432 YBX2Q9Y2T7 364 aaKnown RBP28.88■■■□□ 2.21
CRNDE-206ENST00000559432 CCDC196A0A1B0GTZ2 297 aa28.87■■■□□ 2.21
CRNDE-206ENST00000559432 BAIAP3O94812 1187 aa28.87■■■□□ 2.21
CRNDE-206ENST00000559432 FUT2Q10981 343 aa28.87■■■□□ 2.21
CRNDE-206ENST00000559432 TEX2Q8IWB9 1127 aa28.87■■■□□ 2.21
CRNDE-206ENST00000559432 SLC9A7Q96T83 725 aa28.87■■■□□ 2.21
CRNDE-206ENST00000559432 SCN5AQ14524 2016 aa28.87■■■□□ 2.21
CRNDE-206ENST00000559432 COL6A3P12111 3177 aa28.87■■■□□ 2.21
CRNDE-206ENST00000559432 SMIM10L2AP0DMW4 78 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 SMIM10L2BP0DMW5 78 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 PSMA5P28066 241 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 ADCY7P51828 1080 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 APOBRQ0VD83 1088 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 MTMR1Q13613 665 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 UTP14CQ5TAP6 766 aaKnown RBP28.86■■■□□ 2.21
CRNDE-206ENST00000559432 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.86■■■□□ 2.21
CRNDE-206ENST00000559432 PHOSPHO2Q8TCD6 241 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 BRF1Q92994 677 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 ATP6V0A1Q93050 837 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 RIC8AQ9NPQ8 531 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 UBIAD1Q9Y5Z9 338 aa28.86■■■□□ 2.21
CRNDE-206ENST00000559432 ITGB5P18084 799 aa28.85■■■□□ 2.21
CRNDE-206ENST00000559432 CDC27P30260 824 aa28.85■■■□□ 2.21
CRNDE-206ENST00000559432 KCNJ6P48051 423 aa28.85■■■□□ 2.21
CRNDE-206ENST00000559432 HIC1Q14526 733 aa28.85■■■□□ 2.21
CRNDE-206ENST00000559432 PPP2R2DQ66LE6 453 aa28.85■■■□□ 2.21
CRNDE-206ENST00000559432 GLT8D2Q9H1C3 349 aa28.85■■■□□ 2.21
CRNDE-206ENST00000559432 PRDM12Q9H4Q4 367 aa28.85■■■□□ 2.21
CRNDE-206ENST00000559432 FAM217BQ9NTX9 383 aaPredicted RBP28.85■■■□□ 2.21
CRNDE-206ENST00000559432 STXBP3O00186 592 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 MAFGO15525 162 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 FOSP01100 380 aaPredicted RBP28.84■■■□□ 2.21
CRNDE-206ENST00000559432 GNAT1P11488 350 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 TRIM71Q2Q1W2 868 aaKnown RBP28.84■■■□□ 2.21
CRNDE-206ENST00000559432 ZNF618Q5T7W0 954 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 TYW1BQ6NUM6 668 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 CNKSR3Q6P9H4 555 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 SERINC5Q86VE9 423 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 JADE2Q9NQC1 790 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 BARHL2Q9NY43 387 aa28.84■■■□□ 2.21
CRNDE-206ENST00000559432 SMCO2A6NFE2 343 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 ATP9AO75110 1047 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 KCNA2P16389 499 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 RPS6KB1P23443 525 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 THPOP40225 353 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 TRIM50Q86XT4 487 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 WNT8BQ93098 351 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 RNPEPQ9H4A4 650 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 PKD2L1Q9P0L9 805 aa28.83■■■□□ 2.21
CRNDE-206ENST00000559432 KIF28PB7ZC32 967 aa28.82■■■□□ 2.2
CRNDE-206ENST00000559432 DLL1O00548 723 aa28.82■■■□□ 2.2
CRNDE-206ENST00000559432 CXCL10P02778 98 aa28.82■■■□□ 2.2
CRNDE-206ENST00000559432 MYOGP15173 224 aa28.82■■■□□ 2.2
CRNDE-206ENST00000559432 ADD1P35611 737 aaKnown RBP28.82■■■□□ 2.2
CRNDE-206ENST00000559432 GPNMBQ14956 572 aa28.82■■■□□ 2.2
CRNDE-206ENST00000559432 NBNO60934 754 aa28.81■■■□□ 2.2
CRNDE-206ENST00000559432 HOXC8P31273 242 aa28.81■■■□□ 2.2
CRNDE-206ENST00000559432 TCF7P36402 384 aaPredicted RBP28.81■■■□□ 2.2
CRNDE-206ENST00000559432 HERC6Q8IVU3 1022 aa28.81■■■□□ 2.2
CRNDE-206ENST00000559432 SEPT1Q8WYJ6 367 aa28.81■■■□□ 2.2
CRNDE-206ENST00000559432 SETD4Q9NVD3 440 aa28.81■■■□□ 2.2
CRNDE-206ENST00000559432 TELO2Q9Y4R8 837 aa28.81■■■□□ 2.2
CRNDE-206ENST00000559432 EMSYQ7Z589 1322 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 RSPH10B2B2RC85 870 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 TREHO43280 583 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 EPB41L2O43491 1005 aaKnown RBP28.8■■■□□ 2.2
CRNDE-206ENST00000559432 RSPH10BP0C881 870 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 AP3B2Q13367 1082 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 PGBD1Q96JS3 809 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 MXRA8Q9BRK3 442 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 ANO3Q9BYT9 981 aa28.8■■■□□ 2.2
CRNDE-206ENST00000559432 TRIP12Q14669 1992 aaPredicted RBP28.79■■■□□ 2.2
CRNDE-206ENST00000559432 GBF1Q92538 1859 aa28.79■■■□□ 2.2
CRNDE-206ENST00000559432 EFCAB14O75071 495 aa28.79■■■□□ 2.2
CRNDE-206ENST00000559432 PFKFB3Q16875 520 aaPredicted RBP28.79■■■□□ 2.2
CRNDE-206ENST00000559432 TRAF7Q6Q0C0 670 aa28.79■■■□□ 2.2
CRNDE-206ENST00000559432 FBXL16Q8N461 479 aa28.79■■■□□ 2.2
CRNDE-206ENST00000559432 ABHD14A-ACY1A0A1B0GW23 586 aa28.78■■■□□ 2.2
CRNDE-206ENST00000559432 CA3P07451 260 aa28.78■■■□□ 2.2
CRNDE-206ENST00000559432 SCG2P13521 617 aa28.78■■■□□ 2.2
CRNDE-206ENST00000559432 WDR5P61964 334 aaKnown RBP28.78■■■□□ 2.2
CRNDE-206ENST00000559432 AKAP17AQ02040 695 aaKnown RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms