RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MOXD2PA6NHM9 499 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 KBTBD13C9JR72 458 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 MSH4O15457 936 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 ZNF286BP0CG31 522 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 USP11P51784 963 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 HIC1Q14526 733 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNX1-204ENST00000559061 PRR16Q569H4 304 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 MCTP2Q6DN12 878 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 KCNV1Q6PIU1 500 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 SLC39A5Q6ZMH5 540 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 NLRX1Q86UT6 975 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 PLA2G4DQ86XP0 818 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 SLC43A3Q8NBI5 491 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 ETNPPLQ8TBG4 499 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 PCYT2Q99447 389 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 C16orf70Q9BSU1 422 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 AP5M1Q9H0R1 490 aa13.02□□□□□ -0.33
SNX1-204ENST00000559061 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 HAS3O00219 553 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 XBP1P17861 261 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 CDK7P50613 346 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 ATN1P54259 1190 aaPredicted RBP13.01□□□□□ -0.33
SNX1-204ENST00000559061 LAMC2Q13753 1193 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 TRIM60Q495X7 471 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 Q4G0T1 1027 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 C1orf53Q5VUE5 145 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 MOXD1Q6UVY6 613 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 TRIM50Q86XT4 487 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 DHX37Q8IY37 1157 aaKnown RBP13.01□□□□□ -0.33
SNX1-204ENST00000559061 SPATA33Q96N06 139 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 FOXD4L1Q9NU39 408 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 NFASCO94856 1347 aa13.01□□□□□ -0.33
SNX1-204ENST00000559061 TRIP12Q14669 1992 aaPredicted RBP13□□□□□ -0.33
SNX1-204ENST00000559061 CCDC194A0A1B0GVG4 234 aa13□□□□□ -0.33
SNX1-204ENST00000559061 F2P00734 622 aa13□□□□□ -0.33
SNX1-204ENST00000559061 MYL3P08590 195 aa13□□□□□ -0.33
SNX1-204ENST00000559061 U2AF2P26368 475 aaKnown RBP eCLIP13□□□□□ -0.33
SNX1-204ENST00000559061 CPT1AP50416 773 aa13□□□□□ -0.33
SNX1-204ENST00000559061 TOB1P50616 345 aaPredicted RBP13□□□□□ -0.33
SNX1-204ENST00000559061 RTP1P59025 263 aa13□□□□□ -0.33
SNX1-204ENST00000559061 NEK8Q86SG6 692 aa13□□□□□ -0.33
SNX1-204ENST00000559061 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
SNX1-204ENST00000559061 PCSK9Q8NBP7 692 aaKnown RBP13□□□□□ -0.33
SNX1-204ENST00000559061 HAS1Q92839 578 aa13□□□□□ -0.33
SNX1-204ENST00000559061 SLC5A5Q92911 643 aa13□□□□□ -0.33
SNX1-204ENST00000559061 INTS4Q96HW7 963 aaKnown RBP13□□□□□ -0.33
SNX1-204ENST00000559061 FOXP1Q9H334 677 aaPredicted RBP13□□□□□ -0.33
SNX1-204ENST00000559061 KCNMB3Q9NPA1 279 aa13□□□□□ -0.33
SNX1-204ENST00000559061 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
SNX1-204ENST00000559061 PDE4DIPQ5VU43 2346 aa13□□□□□ -0.33
SNX1-204ENST00000559061 ELP1O95163 1332 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 IPO5O00410 1097 aaKnown RBP12.99□□□□□ -0.33
SNX1-204ENST00000559061 MAFGO15525 162 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 PSMD10O75832 226 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 LGALS2P05162 132 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 SETQ01105 290 aaPredicted RBP12.99□□□□□ -0.33
SNX1-204ENST00000559061 SP4Q02446 784 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 MLLT1Q03111 559 aaPredicted RBP12.99□□□□□ -0.33
SNX1-204ENST00000559061 NEDD9Q14511 834 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 NBR1Q14596 966 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 CDHR1Q96JP9 859 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 TMEM60Q9H2L4 133 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 SPC25Q9HBM1 224 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 JPH1Q9HDC5 661 aaPredicted RBP12.99□□□□□ -0.33
SNX1-204ENST00000559061 STARD7Q9NQZ5 370 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
SNX1-204ENST00000559061 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
SNX1-204ENST00000559061 SIP14410 1827 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 IGKV6D-21A0A0A0MT36 114 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 DDX39AO00148 427 aaKnown RBP12.98□□□□□ -0.33
SNX1-204ENST00000559061 LGR5O75473 907 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 ATG7O95352 703 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 CD4P01730 458 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 ITGB8P26012 769 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 HOXC8P31273 242 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 ZNF76P36508 570 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 ACTR2P61160 394 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 SPIRE1Q08AE8 756 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 TRIM29Q14134 588 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 ANKRD33Q7Z3H0 272 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 NOSTRINQ8IVI9 506 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 FAM126BQ8IXS8 530 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 ZNF577Q9BSK1 485 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 MTG1Q9BT17 334 aaPredicted RBP12.98□□□□□ -0.33
SNX1-204ENST00000559061 MLXIPQ9HAP2 919 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 POLR3EQ9NVU0 708 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 SLC9A2Q9UBY0 812 aa12.98□□□□□ -0.33
SNX1-204ENST00000559061 DDX25Q9UHL0 483 aaKnown RBP12.98□□□□□ -0.33
SNX1-204ENST00000559061 TANC1Q9C0D5 1861 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 A0A0U1RQG5 324 aaPredicted RBP12.97□□□□□ -0.33
SNX1-204ENST00000559061 ARVCFO00192 962 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 PPFIA4O75335 1185 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 ATP4AP20648 1035 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 SYT1P21579 422 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms