RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 UNC80Q8N2C7 3258 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 REC8O95072 547 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 PTK7Q13308 1070 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 GPNMBQ14956 572 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 CYFIP1Q7L576 1253 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 DEFB128Q7Z7B8 93 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 RETREG2Q8NC44 543 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 WNT8BQ93098 351 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 JAKMIP1Q96N16 626 aaKnown RBP19.54■□□□□ 0.72
LRRC28-210ENST00000558879 ZNF576Q9H609 170 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 UBIAD1Q9Y5Z9 338 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 NLRC5Q86WI3 1866 aa19.54■□□□□ 0.72
LRRC28-210ENST00000558879 H3BRB1 525 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 STXBP3O00186 592 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 KCNA2P16389 499 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 ITGB5P18084 799 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 GRIN2CQ14957 1233 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 TRAF7Q6Q0C0 670 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 BLOC1S2Q6QNY1 142 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 LRRC8DQ7L1W4 858 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 NLRX1Q86UT6 975 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 TUT1Q9H6E5 874 aaKnown RBP19.53■□□□□ 0.72
LRRC28-210ENST00000558879 PCDHA6Q9UN73 950 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 PCDHA8Q9Y5H6 950 aa19.53■□□□□ 0.72
LRRC28-210ENST00000558879 SPDYE3A6NKU9 549 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 NOP56O00567 594 aaKnown RBP19.52■□□□□ 0.72
LRRC28-210ENST00000558879 PARNO95453 639 aaKnown RBP19.52■□□□□ 0.72
LRRC28-210ENST00000558879 CXCL10P02778 98 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 NEFLP07196 543 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 CKBP12277 381 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 SELPP16109 830 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 NAPAP54920 295 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 APOBRQ0VD83 1088 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 Q6ZUG5 572 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 SLC17A8Q8NDX2 589 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 USP26Q9BXU7 913 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 RIC8AQ9NPQ8 531 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 BARHL2Q9NY43 387 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 YBX2Q9Y2T7 364 aaKnown RBP19.52■□□□□ 0.72
LRRC28-210ENST00000558879 TELO2Q9Y4R8 837 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
LRRC28-210ENST00000558879 PRUNE2Q8WUY3 3088 aa19.52■□□□□ 0.71
LRRC28-210ENST00000558879 ZBBXA8MT70 800 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 ATP9AO75110 1047 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 BAIAP3O94812 1187 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 ACTN1P12814 892 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 FOSL2P15408 326 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 RPS6KB1P23443 525 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 CLK2P49760 499 aaKnown RBP19.51■□□□□ 0.71
LRRC28-210ENST00000558879 METAP2P50579 478 aaKnown RBP eCLIP19.51■□□□□ 0.71
LRRC28-210ENST00000558879 ZNF200P98182 395 aaPredicted RBP19.51■□□□□ 0.71
LRRC28-210ENST00000558879 SERINC5Q86VE9 423 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 GIMAP8Q8ND71 665 aaPredicted RBP19.51■□□□□ 0.71
LRRC28-210ENST00000558879 BRF1Q92994 677 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 CDHR1Q96JP9 859 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 SLC9A7Q96T83 725 aa19.51■□□□□ 0.71
LRRC28-210ENST00000558879 NBNO60934 754 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 SMIM10L2AP0DMW4 78 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 SMIM10L2BP0DMW5 78 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 ATP2A2P16615 1042 aaKnown RBP19.5■□□□□ 0.71
LRRC28-210ENST00000558879 TRIM50Q86XT4 487 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 MAFAQ8NHW3 353 aaPredicted RBP19.5■□□□□ 0.71
LRRC28-210ENST00000558879 NKX2-4Q9H2Z4 354 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 EHMT1Q9H9B1 1298 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 MSRAQ9UJ68 235 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 PCDHA11Q9Y5I1 949 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 V9GY48 417 aaPredicted RBP19.5■□□□□ 0.71
LRRC28-210ENST00000558879 EVPLQ92817 2033 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 RALGAPA2Q2PPJ7 1873 aa19.5■□□□□ 0.71
LRRC28-210ENST00000558879 ADD1P35611 737 aaKnown RBP19.49■□□□□ 0.71
LRRC28-210ENST00000558879 ADCY7P51828 1080 aa19.49■□□□□ 0.71
LRRC28-210ENST00000558879 RABGGTBP53611 331 aa19.49■□□□□ 0.71
LRRC28-210ENST00000558879 MTMR1Q13613 665 aa19.49■□□□□ 0.71
LRRC28-210ENST00000558879 MBTPS1Q14703 1052 aa19.49■□□□□ 0.71
LRRC28-210ENST00000558879 PFKFB3Q16875 520 aaPredicted RBP19.49■□□□□ 0.71
LRRC28-210ENST00000558879 ANO3Q9BYT9 981 aa19.49■□□□□ 0.71
LRRC28-210ENST00000558879 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
LRRC28-210ENST00000558879 TRANK1O15050 2925 aa19.49■□□□□ 0.71
LRRC28-210ENST00000558879 CCDC196A0A1B0GTZ2 297 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 ESYT2A0FGR8 921 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 C17orf102A2RUQ5 167 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 MAFGO15525 162 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 EVCP57679 992 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 ADAM17P78536 824 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 FGD1P98174 961 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 AP3B2Q13367 1082 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 ZNF618Q5T7W0 954 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 PHOSPHO2Q8TCD6 241 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 RNPEPQ9H4A4 650 aa19.48■□□□□ 0.71
LRRC28-210ENST00000558879 ZNF215Q9UL58 517 aaPredicted RBP19.48■□□□□ 0.71
LRRC28-210ENST00000558879 ATG2AQ2TAZ0 1938 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 COL4A6Q14031 1691 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 SMCO2A6NFE2 343 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 FOSP01100 380 aaPredicted RBP19.47■□□□□ 0.71
LRRC28-210ENST00000558879 SCG2P13521 617 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 PSMA5P28066 241 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 TCF7P36402 384 aaPredicted RBP19.47■□□□□ 0.71
LRRC28-210ENST00000558879 SREBF1P36956 1147 aa19.47■□□□□ 0.71
LRRC28-210ENST00000558879 NTRK3Q16288 839 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms