RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 WNK4Q96J92 1243 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 MTA3Q9BTC8 594 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 PCGF6Q9BYE7 350 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.06□□□□□ -1.44
CASC4-206ENST00000558847 CABP5Q9NP86 173 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 TMEFF2Q9UIK5 374 aaPredicted RBP6.06□□□□□ -1.44
CASC4-206ENST00000558847 MBD1Q9UIS9 605 aaPredicted RBP6.06□□□□□ -1.44
CASC4-206ENST00000558847 PCDHA9Q9Y5H5 950 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 ASXL2Q76L83 1435 aa6.06□□□□□ -1.44
CASC4-206ENST00000558847 A0A0G2JLL6 359 aaPredicted RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 C7orf72A4D263 438 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 HRKO00198 91 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 SRGAP3O43295 1099 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 FOXD2O60548 495 aaPredicted RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 KPNA6O60684 536 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 PPP1R11O60927 126 aaPredicted RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 YBX1P67809 324 aaKnown RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 ST5P78524 1137 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 CYP4F8P98187 520 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 OCRLQ01968 901 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 LSAMPQ13449 338 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 ZNF460Q14592 562 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 PLEKHG6Q3KR16 790 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 RNF219Q5W0B1 726 aaPredicted RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 OLFML2BQ68BL8 750 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 PKN3Q6P5Z2 889 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 KCNC2Q96PR1 638 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 TTC1Q99614 292 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 CELF4Q9BZC1 486 aaKnown RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 PDLIM7Q9NR12 457 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 SAMD15Q9P1V8 674 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 APOBEC2Q9Y235 224 aaKnown RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 PCDHA8Q9Y5H6 950 aa6.05□□□□□ -1.44
CASC4-206ENST00000558847 TIMM13Q9Y5L4 95 aaPredicted RBP6.05□□□□□ -1.44
CASC4-206ENST00000558847 TRIM13O60858 407 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 GAS7O60861 476 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 DBHP09172 617 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 SYN1P17600 705 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 GRK2P25098 689 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 TACR1P25103 407 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 VIPR1P32241 457 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 GRK3P35626 688 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 AFF3P51826 1226 aaKnown RBP6.04□□□□□ -1.44
CASC4-206ENST00000558847 ARHGAP44Q17R89 818 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 RGL3Q3MIN7 710 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 PIK3R6Q5UE93 754 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 UBR7Q8N806 425 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 RCBTB1Q8NDN9 531 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 DPF3Q92784 378 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 FBXW5Q969U6 566 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 SCYL1Q96KG9 808 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 IFT22Q9H7X7 185 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 GULP1Q9UBP9 304 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 ZKSCAN5Q9Y2L8 839 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 PCDHA2Q9Y5H9 948 aa6.04□□□□□ -1.44
CASC4-206ENST00000558847 H7BY64 318 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 CBX4O00257 560 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 SOD2P04179 222 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 GLI4P10075 376 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 ARL4AP40617 200 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 EPHB3P54753 998 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 FAPQ12884 760 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 STRN3Q13033 797 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 PLEKHN1Q494U1 663 aaPredicted RBP6.03□□□□□ -1.44
CASC4-206ENST00000558847 RPTNQ6XPR3 784 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 NLRP10Q86W26 655 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 Q8N1Y9 231 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 WDR66Q8TBY9 1149 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 CHAMP1Q96JM3 812 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 MTFR1LQ9H019 292 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 KLHL14Q9P2G3 628 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 FBXL7Q9UJT9 491 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 RWDD3Q9Y3V2 267 aa6.03□□□□□ -1.44
CASC4-206ENST00000558847 FAM83GA6ND36 823 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 NUDT19A8MXV4 375 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 N4BP3O15049 544 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 EYA4O95677 639 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 CYBBP04839 570 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 MPOP05164 745 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 POU3F3P20264 500 aaPredicted RBP6.02□□□□□ -1.45
CASC4-206ENST00000558847 CDKN1CP49918 316 aaPredicted RBP6.02□□□□□ -1.45
CASC4-206ENST00000558847 PCBP1Q15365 356 aaKnown RBP eCLIP6.02□□□□□ -1.45
CASC4-206ENST00000558847 CRY1Q16526 586 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 VMACQ2NL98 169 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 BICRALQ6AI39 1079 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 C16orf59Q7L2K0 433 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 C11orf74Q86VG3 221 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 SPATS2Q86XZ4 545 aaKnown RBP6.02□□□□□ -1.45
CASC4-206ENST00000558847 IGSF22Q8N9C0 903 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 PCDH19Q8TAB3 1148 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 PUS7LQ9H0K6 701 aaKnown RBP6.02□□□□□ -1.45
CASC4-206ENST00000558847 CNTD2Q9H8S5 307 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 COA3Q9Y2R0 106 aaPredicted RBP6.02□□□□□ -1.45
CASC4-206ENST00000558847 NUB1Q9Y5A7 615 aa6.02□□□□□ -1.45
CASC4-206ENST00000558847 A0A1W2PQ27 194 aa6.01□□□□□ -1.45
CASC4-206ENST00000558847 A0A1W2PQ64 194 aa6.01□□□□□ -1.45
CASC4-206ENST00000558847 A0A1W2PQC6 194 aa6.01□□□□□ -1.45
CASC4-206ENST00000558847 A0A1W2PQD8 194 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms