RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 NTRK3Q16288 839 aa17.5■□□□□ 0.39
RPL28-207ENST00000558815 PKN1Q16512 942 aa17.5■□□□□ 0.39
RPL28-207ENST00000558815 TRIM50Q86XT4 487 aa17.5■□□□□ 0.39
RPL28-207ENST00000558815 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
RPL28-207ENST00000558815 CDHR1Q96JP9 859 aa17.5■□□□□ 0.39
RPL28-207ENST00000558815 GPR20Q99678 358 aa17.5■□□□□ 0.39
RPL28-207ENST00000558815 RNF26Q9BY78 433 aaPredicted RBP17.5■□□□□ 0.39
RPL28-207ENST00000558815 C6orf50Q9HD87 102 aa17.5■□□□□ 0.39
RPL28-207ENST00000558815 H3BRB1 525 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 HAS3O00219 553 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 FOSP01100 380 aaPredicted RBP17.49■□□□□ 0.39
RPL28-207ENST00000558815 FGBP02675 491 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 HOXD8P13378 290 aaPredicted RBP17.49■□□□□ 0.39
RPL28-207ENST00000558815 ZNF76P36508 570 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 EVCP57679 992 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
RPL28-207ENST00000558815 AP3B2Q13367 1082 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 BFSP2Q13515 415 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 OTOP2Q7RTS6 562 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 SESTD1Q86VW0 696 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 GIMAP8Q8ND71 665 aaPredicted RBP17.49■□□□□ 0.39
RPL28-207ENST00000558815 SENP7Q9BQF6 1050 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 C16orf70Q9BSU1 422 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 GLT8D2Q9H1C3 349 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 TUT1Q9H6E5 874 aaKnown RBP17.49■□□□□ 0.39
RPL28-207ENST00000558815 JADE2Q9NQC1 790 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 VPS54Q9P1Q0 977 aa17.49■□□□□ 0.39
RPL28-207ENST00000558815 ADAMTS3O15072 1205 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 KCNA2P16389 499 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 IFNAR1P17181 557 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 CLK2P49760 499 aaKnown RBP17.48■□□□□ 0.39
RPL28-207ENST00000558815 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
RPL28-207ENST00000558815 ZNF697Q5TEC3 545 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 GPR153Q6NV75 609 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
RPL28-207ENST00000558815 CCDC155Q8N6L0 562 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 CYP2W1Q8TAV3 490 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 MXRA8Q9BRK3 442 aa17.48■□□□□ 0.39
RPL28-207ENST00000558815 ZBBXA8MT70 800 aa17.47■□□□□ 0.39
RPL28-207ENST00000558815 IQCF3P0C7M6 154 aa17.47■□□□□ 0.39
RPL28-207ENST00000558815 TCF7P36402 384 aaPredicted RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 SMAD3P84022 425 aaKnown RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 ARHGAP4P98171 946 aa17.47■□□□□ 0.39
RPL28-207ENST00000558815 FAM109BQ6ICB4 259 aaPredicted RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 CPLX2Q6PUV4 134 aaKnown RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 REXO1Q8N1G1 1221 aaKnown RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
RPL28-207ENST00000558815 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
RPL28-207ENST00000558815 DHX38Q92620 1227 aaKnown RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 ZNF274Q96GC6 653 aaPredicted RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
RPL28-207ENST00000558815 ZMYND12Q9H0C1 365 aa17.47■□□□□ 0.39
RPL28-207ENST00000558815 MTIF3Q9H2K0 278 aaKnown RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 CXXC1Q9P0U4 656 aaPredicted RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 LAMA2P24043 3122 aaKnown RBP17.47■□□□□ 0.39
RPL28-207ENST00000558815 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.46■□□□□ 0.39
RPL28-207ENST00000558815 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.46■□□□□ 0.39
RPL28-207ENST00000558815 ESYT2A0FGR8 921 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 C17orf102A2RUQ5 167 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 GRXCR1A8MXD5 290 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 DTNBO60941 627 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 SEC24BO95487 1268 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 ARP10275 920 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 GNA11P29992 359 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 SREBF1P36956 1147 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 NLRP5P59047 1200 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 ANAPC15P60006 121 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 HIC1Q14526 733 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 UIMC1Q96RL1 719 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 FTOQ9C0B1 505 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPL28-207ENST00000558815 KCNH7Q9NS40 1196 aa17.46■□□□□ 0.39
RPL28-207ENST00000558815 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.39
RPL28-207ENST00000558815 GBF1Q92538 1859 aa17.46■□□□□ 0.38
RPL28-207ENST00000558815 RBAK-RBAKDNI3L0D1 243 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
RPL28-207ENST00000558815 MARK3P27448 753 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 CEP55Q53EZ4 464 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 TEX2Q8IWB9 1127 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 AFAP1L1Q8TED9 768 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 HERVK_113Q902F9 699 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 WNT8BQ93098 351 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 SDF4Q9BRK5 362 aa17.45■□□□□ 0.38
RPL28-207ENST00000558815 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
RPL28-207ENST00000558815 JPH1Q9HDC5 661 aaPredicted RBP17.45■□□□□ 0.38
RPL28-207ENST00000558815 GSTTP1A0A1W2PQM5 241 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 MAFGO15525 162 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
RPL28-207ENST00000558815 SELPP16109 830 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 AK2P54819 239 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 PTK7Q13308 1070 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 LRRC8DQ7L1W4 858 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 BICD2Q8TD16 824 aa17.44■□□□□ 0.38
RPL28-207ENST00000558815 SEPT1Q8WYJ6 367 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms