RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 TPCN1Q9ULQ1 816 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 F2P00734 622 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 NR3C2P08235 984 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 EXOSC10Q01780 885 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 IKBKEQ14164 716 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 Q6ZUG5 572 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 HCN4Q9Y3Q4 1203 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 OPLAHO14841 1288 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 SORBS3O60504 671 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 KDM4AO75164 1064 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 RGS20O76081 388 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 ME3Q16798 604 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 LEXMQ3ZCV2 418 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 FBXO11Q86XK2 927 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 NECAB1Q8N987 351 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 PPTC7Q8NI37 304 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 C17orf80Q9BSJ5 609 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 MRPL11Q9Y3B7 192 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
RABGGTA-204ENST00000558376 EFCAB14O75071 495 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 LGR5O75473 907 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 DDIT3P35638 169 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 MCM2P49736 904 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 FAM178BQ8IXR5 827 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 KATNAL1Q9BW62 490 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 OSBPL7Q9BZF2 842 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 B4E1Z4 1266 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 CFBP00751 764 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 KCNA5P22460 613 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 SP2Q02086 613 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 STK3Q13188 491 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 ASPRV1Q53RT3 343 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 ZSWIM5Q9P217 1185 aa12.89□□□□□ -0.35
RABGGTA-204ENST00000558376 PPP1R11O60927 126 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 MYCLP12524 364 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 IL9P15248 144 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 HSD17B4P51659 736 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 HTRA4P83105 476 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 GJD3Q8N144 294 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 BRF1Q92994 677 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 BCAS3Q9H6U6 928 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 INSL6Q9Y581 213 aa12.88□□□□□ -0.35
RABGGTA-204ENST00000558376 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 THPOP40225 353 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 ANTXR2P58335 489 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 FGD1P98174 961 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 GHRHRQ02643 423 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 ST3GAL1Q11201 340 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 CUL4AQ13619 759 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 PKP1Q13835 747 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 SERINC5Q86VE9 423 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 C16orf70Q9BSU1 422 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 NLRC5Q86WI3 1866 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 RSPH10B2B2RC85 870 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 GGPS1O95749 300 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 RSPH10BP0C881 870 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 PLEKHG4Q58EX7 1191 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 PTCRAQ6ISU1 281 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 VSIG10LQ86VR7 867 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-204ENST00000558376 SPATA33Q96N06 139 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms