RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 STK32CQ86UX6 486 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 ADGRG2Q8IZP9 1017 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 LILRB2Q8N423 598 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 UHMK1Q8TAS1 419 aaKnown RBP5.06□□□□□ -1.6
SPG11-206ENST00000558093 KISS1RQ969F8 398 aaPredicted RBP5.06□□□□□ -1.6
SPG11-206ENST00000558093 FBXW5Q969U6 566 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 C11orf84Q9BUA3 381 aaPredicted RBP5.06□□□□□ -1.6
SPG11-206ENST00000558093 SLC52A2Q9HAB3 445 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 PCDHA9Q9Y5H5 950 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 A0A1B0GTL3 188 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 GSTA4O15217 222 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 NKRFO15226 690 aaKnown RBP eCLIP5.05□□□□□ -1.6
SPG11-206ENST00000558093 KRT15P19012 456 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 DNM2P50570 870 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 ITGA1P56199 1179 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 TUSC3Q13454 348 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 CRY1Q16526 586 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 TEPPQ6URK8 271 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 LIPIQ6XZB0 460 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.05□□□□□ -1.6
SPG11-206ENST00000558093 RBM12BQ8IXT5 1001 aaKnown RBP5.05□□□□□ -1.6
SPG11-206ENST00000558093 TTLL6Q8N841 843 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 KYQ8NBH2 561 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 SH3TC2Q8TF17 1288 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 ZNF526Q8TF50 670 aaPredicted RBP5.05□□□□□ -1.6
SPG11-206ENST00000558093 MAGEB10Q96LZ2 347 aaPredicted RBP5.05□□□□□ -1.6
SPG11-206ENST00000558093 ZSWIM3Q96MP5 696 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 CLIC6Q96NY7 704 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 SYT3Q9BQG1 590 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 CD244Q9BZW8 370 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 USP35Q9P2H5 1018 aa5.05□□□□□ -1.6
SPG11-206ENST00000558093 ARVCFO00192 962 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 LTFP02788 710 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 PYGMP11217 842 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 THBS2P35442 1172 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 KCNC1P48547 511 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 CR1LQ2VPA4 569 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 VASNQ6EMK4 673 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 TMC5Q6UXY8 1006 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 KCTD1Q719H9 257 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 BRAPQ7Z569 592 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 JMYQ8N9B5 988 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 MARCH10Q8NA82 808 aaPredicted RBP5.04□□□□□ -1.6
SPG11-206ENST00000558093 TTLL11Q8NHH1 800 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 PCDH19Q8TAB3 1148 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 WRNIP1Q96S55 665 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 TMEM209Q96SK2 561 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 MRPL4Q9BYD3 311 aaKnown RBP5.04□□□□□ -1.6
SPG11-206ENST00000558093 NCOA5Q9HCD5 579 aaKnown RBP5.04□□□□□ -1.6
SPG11-206ENST00000558093 PARD6AQ9NPB6 346 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 LUC7LQ9NQ29 371 aaKnown RBP5.04□□□□□ -1.6
SPG11-206ENST00000558093 USP40Q9NVE5 1235 aa5.04□□□□□ -1.6
SPG11-206ENST00000558093 CCDC66A2RUB6 948 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 SH3D21A4FU49 640 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 RASGRP1O95267 797 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 LRG1P02750 347 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 SARSP49591 514 aaKnown RBP5.03□□□□□ -1.6
SPG11-206ENST00000558093 SLURP1P55000 103 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 GPR19Q15760 415 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 PAN2Q504Q3 1202 aaKnown RBP5.03□□□□□ -1.6
SPG11-206ENST00000558093 PRAMEF18Q5VWM3 479 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 ARHGAP36Q6ZRI8 547 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 ZDHHC14Q8IZN3 488 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 NLGN4XQ8N0W4 816 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 CARFQ8N187 725 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 CISD2Q8N5K1 135 aaKnown RBP5.03□□□□□ -1.6
SPG11-206ENST00000558093 LINC00482Q8N8I6 264 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 SYT8Q8NBV8 401 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 FEZF2Q8TBJ5 459 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 KCNC2Q96PR1 638 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 RIC8BQ9NVN3 520 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 CROTQ9UKG9 612 aa5.03□□□□□ -1.6
SPG11-206ENST00000558093 ADAMTS20P59510 1910 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 CYP7B1O75881 506 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 PDE6AP16499 860 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 GJA9P57773 515 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 TRIM61Q5EBN2 209 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 HABP4Q5JVS0 413 aaKnown RBP5.02□□□□□ -1.61
SPG11-206ENST00000558093 C16orf59Q7L2K0 433 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 TP53I13Q8NBR0 393 aaPredicted RBP5.02□□□□□ -1.61
SPG11-206ENST00000558093 GSTCDQ8NEC7 633 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 SLC7A14Q8TBB6 771 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 CLEC4DQ8WXI8 215 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 PIF1Q9H611 641 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 SPATA6Q9NWH7 488 aaPredicted RBP5.02□□□□□ -1.61
SPG11-206ENST00000558093 CBLCQ9ULV8 474 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 SRPK3Q9UPE1 567 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 ATP23Q9Y6H3 246 aa5.02□□□□□ -1.61
SPG11-206ENST00000558093 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.01□□□□□ -1.61
SPG11-206ENST00000558093 WNT9AO14904 365 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 PLD2O14939 933 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 RAPGEF3O95398 923 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 FAHP16930 419 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 RPL13P26373 211 aaKnown RBP5.01□□□□□ -1.61
SPG11-206ENST00000558093 DLX2Q07687 328 aaPredicted RBP5.01□□□□□ -1.61
SPG11-206ENST00000558093 ADAM9Q13443 819 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 FIGNQ5HY92 759 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 NT5DC1Q5TFE4 455 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 BTBD8Q5XKL5 378 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms