RNA–Protein interactions for RNA: ENST00000558056.1

TNFAIP2-202, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-202ENST00000558056 COL6A3P12111 3177 aa18.89■□□□□ 0.62
TNFAIP2-202ENST00000558056 SPATA31C2B4DYI2 1134 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 PPFIA4O75335 1185 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 F2P00734 622 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 SP4Q02446 784 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 ST3GAL1Q11201 340 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 BFSP2Q13515 415 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 NEDD9Q14511 834 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 XRRA1Q6P2D8 792 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 CYFIP1Q7L576 1253 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 NLRX1Q86UT6 975 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 BCAS3Q9H6U6 928 aa18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 SH2B1Q9NRF2 756 aaPredicted RBP18.89■□□□□ 0.61
TNFAIP2-202ENST00000558056 ZBBXA8MT70 800 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 GRXCR1A8MXD5 290 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 CPLX1O14810 134 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 PRPF3O43395 683 aaKnown RBP18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 CTDNEP1O95476 244 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 ICAM3P32942 547 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 SEMA3FQ13275 785 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 SESTD1Q86VW0 696 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 CCDC155Q8N6L0 562 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 HERVK_113Q902F9 699 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 PHKBQ93100 1093 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 EHMT1Q9H9B1 1298 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 CXXC1Q9P0U4 656 aaPredicted RBP18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 GTF2IRD1Q9UHL9 959 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 PCDHA6Q9UN73 950 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 PCDHA8Q9Y5H6 950 aa18.88■□□□□ 0.61
TNFAIP2-202ENST00000558056 PPFIA3O75145 1194 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 DNAJB2P25686 324 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 ADCY7P51828 1080 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 TYW1BQ6NUM6 668 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 CPLX2Q6PUV4 134 aaKnown RBP18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 METTL7BQ6UX53 244 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 GBF1Q92538 1859 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 SNX21Q969T3 373 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 TMX3Q96JJ7 454 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 GUCD1Q96NT3 240 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 STXBP5LQ9Y2K9 1186 aa18.87■□□□□ 0.61
TNFAIP2-202ENST00000558056 STXBP3O00186 592 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 HAS3O00219 553 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 PITPNM1O00562 1244 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 LGALS2P05162 132 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 IQCF3P0C7M6 154 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 HOXD8P13378 290 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 PKN1Q16512 942 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 RASIP1Q5U651 963 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 PPP1R18Q6NYC8 613 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 PGBD1Q96JS3 809 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 SLC26A6Q9BXS9 759 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 TTYH1Q9H313 450 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 SEMA6BQ9H3T3 888 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 RIC8AQ9NPQ8 531 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 PKD2L1Q9P0L9 805 aa18.86■□□□□ 0.61
TNFAIP2-202ENST00000558056 CDH23Q9H251 3354 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 SMCO2A6NFE2 343 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 H3BRB1 525 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 hCG_1984214I3L0E3 225 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 DTNBO60941 627 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 CDKL5O76039 1030 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 PFKMP08237 780 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 ITGB5P18084 799 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 ZNF200P98182 395 aaPredicted RBP18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 SSRP1Q08945 709 aaKnown RBP18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 MTMR1Q13613 665 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 UTP14CQ5TAP6 766 aaKnown RBP18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 CCDC83Q8IWF9 413 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 ZNF713Q8N859 430 aaPredicted RBP18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 CAGE1Q8TC20 777 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 GPRASP2Q96D09 838 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 CDHR1Q96JP9 859 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 C16orf70Q9BSU1 422 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 TUT1Q9H6E5 874 aaKnown RBP18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 BARHL2Q9NY43 387 aa18.85■□□□□ 0.61
TNFAIP2-202ENST00000558056 ACTN1P12814 892 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 RFC2P35250 354 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 PBX2P40425 430 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 AKAP17AQ02040 695 aaKnown RBP18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 PFKFB3Q16875 520 aaPredicted RBP18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 TRIM50Q86XT4 487 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 GIMAP8Q8ND71 665 aaPredicted RBP18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 NSUN7Q8NE18 718 aaKnown RBP18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 TIFAQ96CG3 184 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 CTAGE1Q96RT6 745 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 CDX2Q99626 313 aaPredicted RBP18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 GPR20Q99678 358 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 SENP7Q9BQF6 1050 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 LLPHQ9BRT6 129 aaKnown RBP18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 PBX4Q9BYU1 374 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 TELO2Q9Y4R8 837 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 SLC4A7Q9Y6M7 1214 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 KAT6AQ92794 2004 aa18.84■□□□□ 0.61
TNFAIP2-202ENST00000558056 TET1Q8NFU7 2136 aa18.83■□□□□ 0.61
TNFAIP2-202ENST00000558056 TMEM265A0A087WTH1 108 aa18.83■□□□□ 0.6
TNFAIP2-202ENST00000558056 SCG2P13521 617 aa18.83■□□□□ 0.6
TNFAIP2-202ENST00000558056 FDPSP14324 419 aaKnown RBP18.83■□□□□ 0.6
TNFAIP2-202ENST00000558056 LRRC8DQ7L1W4 858 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms