RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 FRMPD4Q14CM0 1322 aa15.67■□□□□ 0.1
SNRPA1-204ENST00000558020 TANC1Q9C0D5 1861 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 RSPH10B2B2RC85 870 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 SLC27A2O14975 620 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 NBNO60934 754 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 CAND2O75155 1236 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 LGALS2P05162 132 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 RSPH10BP0C881 870 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 GPNMBQ14956 572 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 SKIV2LQ15477 1246 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 USP17L6PQ6QN14 398 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 FANCBQ8NB91 859 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 MYL10Q9BUA6 226 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 LSG1Q9H089 658 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 CERS4Q9HA82 394 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 ANO2Q9NQ90 1003 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 TRANK1O15050 2925 aa15.66■□□□□ 0.1
SNRPA1-204ENST00000558020 TNFRSF10AO00220 468 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 SH2B2O14492 632 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 LGR5O75473 907 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 SMIM10L2AP0DMW4 78 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 SMIM10L2BP0DMW5 78 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 ZNF200P98182 395 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 NECTIN1Q15223 517 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 TRIM71Q2Q1W2 868 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 CREB3L3Q68CJ9 461 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 SRBD1Q8N5C6 995 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 GPKOWQ92917 476 aaPredicted RBP eCLIP15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 EHMT1Q9H9B1 1298 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 MTCH2Q9Y6C9 303 aa15.65■□□□□ 0.1
SNRPA1-204ENST00000558020 SPDYE3A6NKU9 549 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 MEIS2O14770 477 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 MAFGO15525 162 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 GJB5O95377 273 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 AMHP03971 560 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 TEX2Q8IWB9 1127 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 GPR20Q99678 358 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 RNPEPQ9H4A4 650 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 INSL6Q9Y581 213 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 TET1Q8NFU7 2136 aa15.64■□□□□ 0.09
SNRPA1-204ENST00000558020 RFXAPO00287 272 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 PLEKHA8P1O95397 391 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 BMP2KLQ5H9B9 411 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 CCDC82Q8N4S0 544 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 SEPT8Q92599 483 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 GPRASP2Q96D09 838 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 BCAS3Q9H6U6 928 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 LMCD1Q9NZU5 365 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 COG5Q9UP83 839 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 TTC28Q96AY4 2481 aa15.63■□□□□ 0.09
SNRPA1-204ENST00000558020 TREHO43280 583 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 HOXC8P31273 242 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 DEFB103AP81534 67 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 UTP14CQ5TAP6 766 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 TRAF7Q6Q0C0 670 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 CENPQQ7L2Z9 268 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 SGMS1Q86VZ5 419 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 CMTR1Q8N1G2 835 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 ADAMTS19Q8TE59 1207 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 TNPO1Q92973 898 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 WNT8BQ93098 351 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 NEK1Q96PY6 1258 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 TGS1Q96RS0 853 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 SETD4Q9NVD3 440 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 RBM28Q9NW13 759 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 NRCAMQ92823 1304 aa15.62■□□□□ 0.09
SNRPA1-204ENST00000558020 RXRAP19793 462 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 SP4Q02446 784 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 SEMA3FQ13275 785 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 GRB10Q13322 594 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 MTMR1Q13613 665 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 HIC1Q14526 733 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 KRT32Q14532 448 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 MBTPS1Q14703 1052 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 PLEKHG4Q58EX7 1191 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 HEATR3Q7Z4Q2 680 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 RSPH3Q86UC2 560 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 SEPT1Q8WYJ6 367 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 ERAP1Q9NZ08 941 aa15.61■□□□□ 0.09
SNRPA1-204ENST00000558020 HMGB1P09429 215 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 TCF7P36402 384 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 ERVK-21P61565 698 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 ARHGAP4P98171 946 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 FAM117BQ6P1L5 589 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 TAF2Q6P1X5 1199 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 TMTC3Q6ZXV5 915 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 DHX32Q7L7V1 743 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 TMCO2Q7Z6W1 182 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 APBB2Q92870 758 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 GLG1Q92896 1179 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 HLA-CQ95604 372 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 UHRF1Q96T88 793 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 LRRC2Q9BYS8 371 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 GLT8D2Q9H1C3 349 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 SMARCAD1Q9H4L7 1026 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 PCDHA6Q9UN73 950 aa15.6■□□□□ 0.09
SNRPA1-204ENST00000558020 PCDHA8Q9Y5H6 950 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms