RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TFRCP02786 760 aaKnown RBP24.06■■□□□ 1.44
CASC4-204ENST00000557945 C6orf222P0C671 652 aaPredicted RBP24.06■■□□□ 1.44
CASC4-204ENST00000557945 NUCB2P80303 420 aa24.06■■□□□ 1.44
CASC4-204ENST00000557945 ORC2Q13416 577 aaPredicted RBP24.06■■□□□ 1.44
CASC4-204ENST00000557945 LAMC2Q13753 1193 aa24.06■■□□□ 1.44
CASC4-204ENST00000557945 FOXD4L6Q3SYB3 417 aaPredicted RBP24.06■■□□□ 1.44
CASC4-204ENST00000557945 FOXD4L3Q6VB84 417 aaPredicted RBP24.06■■□□□ 1.44
CASC4-204ENST00000557945 ETNPPLQ8TBG4 499 aa24.06■■□□□ 1.44
CASC4-204ENST00000557945 U2AF1L4Q8WU68 220 aaKnown RBP24.06■■□□□ 1.44
CASC4-204ENST00000557945 GJA10Q969M2 543 aa24.06■■□□□ 1.44
CASC4-204ENST00000557945 NFASCO94856 1347 aa24.06■■□□□ 1.44
CASC4-204ENST00000557945 SGPL1O95470 568 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 GJA9P57773 515 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 LRCH2Q5VUJ6 765 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 METTL7BQ6UX53 244 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 SLC5A5Q92911 643 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 FAM20AQ96MK3 541 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 SPATA33Q96N06 139 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 UPF3AQ9H1J1 476 aaKnown RBP24.05■■□□□ 1.44
CASC4-204ENST00000557945 JPH1Q9HDC5 661 aaPredicted RBP24.05■■□□□ 1.44
CASC4-204ENST00000557945 KCNMB3Q9NPA1 279 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.05■■□□□ 1.44
CASC4-204ENST00000557945 TBC1D22BQ9NU19 505 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 TCEAL9Q9UHQ7 104 aa24.05■■□□□ 1.44
CASC4-204ENST00000557945 GAS7O60861 476 aa24.04■■□□□ 1.44
CASC4-204ENST00000557945 FARP2O94887 1054 aaPredicted RBP24.04■■□□□ 1.44
CASC4-204ENST00000557945 IRX5P78411 483 aaPredicted RBP24.04■■□□□ 1.44
CASC4-204ENST00000557945 AFG1LQ8WV93 481 aa24.04■■□□□ 1.44
CASC4-204ENST00000557945 RIT2Q99578 217 aa24.04■■□□□ 1.44
CASC4-204ENST00000557945 TMEM60Q9H2L4 133 aa24.04■■□□□ 1.44
CASC4-204ENST00000557945 MYADML2A6NDP7 307 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 NOP56O00567 594 aaKnown RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 TBX3O15119 743 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 ADAMTS4O75173 837 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 GJA8P48165 433 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 BEX3Q00994 111 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 FSCN1Q16658 493 aaKnown RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 BRDTQ58F21 947 aaPredicted RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 GNASQ5JWF2 1037 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 RNF180Q86T96 592 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 SLFN12Q8IYM2 578 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 ARRDC4Q8NCT1 418 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 HAS1Q92839 578 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 EMID1Q96A84 441 aaPredicted RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 TEKT3Q9BXF9 490 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 SLC9A2Q9UBY0 812 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 POTEFA5A3E0 1075 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 DHX15O43143 795 aaKnown RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 OR52Z1P0C646 297 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 CPT1AP50416 773 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 CEBPZQ03701 1054 aaKnown RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 PTGDRQ13258 359 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 LRRC41Q15345 812 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 HSDL1Q3SXM5 330 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 PPTC7Q8NI37 304 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 ZNF396Q96N95 335 aaPredicted RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 OGDHLQ9ULD0 1010 aa24.03■■□□□ 1.44
CASC4-204ENST00000557945 CIZ1Q9ULV3 898 aaPredicted RBP24.03■■□□□ 1.44
CASC4-204ENST00000557945 TXKP42681 527 aa24.02■■□□□ 1.44
CASC4-204ENST00000557945 SF3A1Q15459 793 aaKnown RBP24.02■■□□□ 1.44
CASC4-204ENST00000557945 MTMR9Q96QG7 549 aa24.02■■□□□ 1.44
CASC4-204ENST00000557945 FTOQ9C0B1 505 aaKnown RBP eCLIP24.02■■□□□ 1.44
CASC4-204ENST00000557945 CRISPLD2Q9H0B8 497 aa24.02■■□□□ 1.44
CASC4-204ENST00000557945 CEP131Q9UPN4 1083 aa24.02■■□□□ 1.44
CASC4-204ENST00000557945 TELO2Q9Y4R8 837 aa24.02■■□□□ 1.44
CASC4-204ENST00000557945 CLIC4Q9Y696 253 aa24.02■■□□□ 1.44
CASC4-204ENST00000557945 CCDC85CA6NKD9 419 aa24.01■■□□□ 1.43
CASC4-204ENST00000557945 CTAGE5O15320 804 aa24.01■■□□□ 1.43
CASC4-204ENST00000557945 ZEB2O60315 1214 aa24.01■■□□□ 1.43
CASC4-204ENST00000557945 PSMD10O75832 226 aa24.01■■□□□ 1.43
CASC4-204ENST00000557945 C4orf32Q8N8J7 132 aa24.01■■□□□ 1.43
CASC4-204ENST00000557945 KLHDC9Q8NEP7 349 aa24.01■■□□□ 1.43
CASC4-204ENST00000557945 TFIP11Q9UBB9 837 aaKnown RBP24.01■■□□□ 1.43
CASC4-204ENST00000557945 ATP6V1DQ9Y5K8 247 aa24.01■■□□□ 1.43
CASC4-204ENST00000557945 KIAA0100Q14667 2235 aaKnown RBP24■■□□□ 1.43
CASC4-204ENST00000557945 DOCK5Q9H7D0 1870 aa24■■□□□ 1.43
CASC4-204ENST00000557945 A6NJR5 290 aa24■■□□□ 1.43
CASC4-204ENST00000557945 CHMP2AO43633 222 aa24■■□□□ 1.43
CASC4-204ENST00000557945 BMP15O95972 392 aa24■■□□□ 1.43
CASC4-204ENST00000557945 MMP3P08254 477 aa24■■□□□ 1.43
CASC4-204ENST00000557945 KRT76Q01546 638 aa24■■□□□ 1.43
CASC4-204ENST00000557945 USP28Q96RU2 1077 aa24■■□□□ 1.43
CASC4-204ENST00000557945 GPR20Q99678 358 aa24■■□□□ 1.43
CASC4-204ENST00000557945 TTC12Q9H892 705 aaPredicted RBP24■■□□□ 1.43
CASC4-204ENST00000557945 CHMP5Q9NZZ3 219 aa24■■□□□ 1.43
CASC4-204ENST00000557945 PCDHA12Q9UN75 941 aa24■■□□□ 1.43
CASC4-204ENST00000557945 KBTBD13C9JR72 458 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 LAD1O00515 517 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 CCNE2O96020 404 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 MYL3P08590 195 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 CST5P28325 142 aaPredicted RBP23.99■■□□□ 1.43
CASC4-204ENST00000557945 ACTR2P61160 394 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 NKX3-2P78367 333 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 KCNA10Q16322 511 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 DGKDQ16760 1214 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 ZNF746Q6NUN9 644 aaPredicted RBP23.99■■□□□ 1.43
CASC4-204ENST00000557945 PCSK9Q8NBP7 692 aaKnown RBP23.99■■□□□ 1.43
CASC4-204ENST00000557945 SEPT1Q8WYJ6 367 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 UNC45AQ9H3U1 944 aa23.99■■□□□ 1.43
CASC4-204ENST00000557945 SAMM50Q9Y512 469 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms