RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 MRVI1Q9Y6F6 885 aa13.16□□□□□ -0.3
LINC00648-204ENST00000557749 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 EIF2AK2P19525 551 aaKnown RBP13.15□□□□□ -0.3
LINC00648-204ENST00000557749 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
LINC00648-204ENST00000557749 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
LINC00648-204ENST00000557749 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 PUS10Q3MIT2 529 aaKnown RBP13.15□□□□□ -0.3
LINC00648-204ENST00000557749 MFSD5Q6N075 450 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.3
LINC00648-204ENST00000557749 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
LINC00648-204ENST00000557749 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 GLT8D2Q9H1C3 349 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 TAF6LQ9Y6J9 622 aa13.15□□□□□ -0.3
LINC00648-204ENST00000557749 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 ZBTB43O43298 467 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 CYTH3O43739 400 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 MYL3P08590 195 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 DGKDQ16760 1214 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 KMT5BQ4FZB7 885 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 BLOC1S3Q6QNY0 202 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 CCDC155Q8N6L0 562 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 SMARCC2Q8TAQ2 1214 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 MTRQ99707 1265 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 PPP4R2Q9NY27 417 aa13.14□□□□□ -0.31
LINC00648-204ENST00000557749 RANBP2P49792 3224 aaKnown RBP13.13□□□□□ -0.31
LINC00648-204ENST00000557749 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
LINC00648-204ENST00000557749 CD4P01730 458 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 PFKMP08237 780 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 PGM5Q15124 567 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 FAM109BQ6ICB4 259 aaPredicted RBP13.13□□□□□ -0.31
LINC00648-204ENST00000557749 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 APOA5Q6Q788 366 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 TMTC3Q6ZXV5 915 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 SH3RF1Q7Z6J0 888 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 VSIG10LQ86VR7 867 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 GIMAP8Q8ND71 665 aaPredicted RBP13.13□□□□□ -0.31
LINC00648-204ENST00000557749 PPTC7Q8NI37 304 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 COL20A1Q9P218 1284 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
LINC00648-204ENST00000557749 KIAA1217Q5T5P2 1943 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 OPLAHO14841 1288 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 HSPA4P34932 840 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 NEDD9Q14511 834 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 RTN1Q16799 776 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 RPUSD2Q8IZ73 545 aaKnown RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 ZNF516Q92618 1163 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 DDX41Q9UJV9 622 aaKnown RBP13.12□□□□□ -0.31
LINC00648-204ENST00000557749 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
LINC00648-204ENST00000557749 SPDYE3A6NKU9 549 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 HOXA2O43364 376 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 FIBPO43427 364 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 PPFIA4O75335 1185 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 PARNO95453 639 aaKnown RBP13.11□□□□□ -0.31
LINC00648-204ENST00000557749 MMP3P08254 477 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 RFC2P35250 354 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 EXOSC10Q01780 885 aaKnown RBP13.11□□□□□ -0.31
LINC00648-204ENST00000557749 ARHGAP1Q07960 439 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 BFSP2Q13515 415 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 FAM47CQ5HY64 1035 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 SESTD1Q86VW0 696 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
LINC00648-204ENST00000557749 KCNB2Q92953 911 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 PCDHB3Q9Y5E6 796 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
LINC00648-204ENST00000557749 SCN10AQ9Y5Y9 1956 aa13.11□□□□□ -0.31
LINC00648-204ENST00000557749 GOLGA8AA7E2F4 631 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 NOP56O00567 594 aaKnown RBP13.1□□□□□ -0.31
LINC00648-204ENST00000557749 MAFGO15525 162 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
LINC00648-204ENST00000557749 ICAM3P32942 547 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 COPS2P61201 443 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 SRBD1Q8N5C6 995 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms