RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 UPF3BQ9BZI7 483 aaKnown RBP19.17■□□□□ 0.66
NEK9-211ENST00000557673 EMSYQ7Z589 1322 aa19.17■□□□□ 0.66
NEK9-211ENST00000557673 TRIP12Q14669 1992 aaPredicted RBP19.17■□□□□ 0.66
NEK9-211ENST00000557673 LCHNA4D1U4 455 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 HAS3O00219 553 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 OPLAHO14841 1288 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 CYTH3O43739 400 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 ERVK-21P61565 698 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 DEFB103AP81534 67 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 TRAF1Q13077 416 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 RUFY3Q7L099 469 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 PIGSQ96S52 555 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 AGXT2Q9BYV1 514 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 RIOX1Q9H6W3 641 aa19.16■□□□□ 0.66
NEK9-211ENST00000557673 CCDC69A6NI79 296 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 TGFB3P10600 412 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 HSD17B4P51659 736 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 NFXL1Q6ZNB6 911 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 TMTC2Q8N394 836 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 FBXL16Q8N461 479 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 GDPD5Q8WTR4 605 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 BACH2Q9BYV9 841 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 HCN4Q9Y3Q4 1203 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 INSL6Q9Y581 213 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 PCDHA1Q9Y5I3 950 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 CYP46A1Q9Y6A2 500 aa19.15■□□□□ 0.66
NEK9-211ENST00000557673 LGR5O75473 907 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 ZNF286BP0CG31 522 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 HOXD8P13378 290 aaPredicted RBP19.14■□□□□ 0.65
NEK9-211ENST00000557673 RBM25P49756 843 aaKnown RBP19.14■□□□□ 0.65
NEK9-211ENST00000557673 GHRHRQ02643 423 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 TMEM31Q5JXX7 168 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 ZNF618Q5T7W0 954 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 APOA5Q6Q788 366 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 Q6ZUG5 572 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 TMCO2Q7Z6W1 182 aaPredicted RBP19.14■□□□□ 0.65
NEK9-211ENST00000557673 PIBF1Q8WXW3 757 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 SPATA33Q96N06 139 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 C22orf23Q9BZE7 217 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 SUGCTQ9HAC7 445 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 UPF2Q9HAU5 1272 aaKnown RBP19.14■□□□□ 0.65
NEK9-211ENST00000557673 MTUS1Q9ULD2 1270 aa19.14■□□□□ 0.65
NEK9-211ENST00000557673 LINC01553A4QN01 128 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 AMHP03971 560 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 MYCLP12524 364 aaPredicted RBP19.13■□□□□ 0.65
NEK9-211ENST00000557673 TRIM71Q2Q1W2 868 aaKnown RBP19.13■□□□□ 0.65
NEK9-211ENST00000557673 CELF3Q5SZQ8 465 aaKnown RBP19.13■□□□□ 0.65
NEK9-211ENST00000557673 MYSM1Q5VVJ2 828 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 SPRED2Q7Z698 418 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 CTCFLQ8NI51 663 aaPredicted RBP19.13■□□□□ 0.65
NEK9-211ENST00000557673 MAP3K14Q99558 947 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 PDCD2LQ9BRP1 358 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 LRFN3Q9BTN0 628 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 EPHX3Q9H6B9 360 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 SLC12A7Q9Y666 1083 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 NID2Q14112 1375 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 KIAA1217Q5T5P2 1943 aa19.13■□□□□ 0.65
NEK9-211ENST00000557673 RXRAP19793 462 aa19.12■□□□□ 0.65
NEK9-211ENST00000557673 FGD1P98174 961 aa19.12■□□□□ 0.65
NEK9-211ENST00000557673 VSIG10LQ86VR7 867 aa19.12■□□□□ 0.65
NEK9-211ENST00000557673 MICU3Q86XE3 530 aa19.12■□□□□ 0.65
NEK9-211ENST00000557673 RAB11FIP4Q86YS3 637 aa19.12■□□□□ 0.65
NEK9-211ENST00000557673 BRF1Q92994 677 aa19.12■□□□□ 0.65
NEK9-211ENST00000557673 BRPF3Q9ULD4 1205 aa19.12■□□□□ 0.65
NEK9-211ENST00000557673 PNMA6FA0A0J9YX94 578 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 KLF18A0A0U1RQI7 1052 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 RSPH10B2B2RC85 870 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 PLEKHA8P1O95397 391 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 GGPS1O95749 300 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 RSPH10BP0C881 870 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 CALM1P0DP23 149 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 CALM2P0DP24 149 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 CALM3P0DP25 149 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 CCND2P30279 289 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 HOXA13P31271 388 aaPredicted RBP19.11■□□□□ 0.65
NEK9-211ENST00000557673 KIF5BP33176 963 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 THPOP40225 353 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 RCAN1P53805 252 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 TOB2Q14106 344 aaPredicted RBP19.11■□□□□ 0.65
NEK9-211ENST00000557673 FAM117BQ6P1L5 589 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 TRAF7Q6Q0C0 670 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 SERINC5Q86VE9 423 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 KIF2CQ99661 725 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 UBE2ZQ9H832 354 aaPredicted RBP19.11■□□□□ 0.65
NEK9-211ENST00000557673 MLXIPQ9HAP2 919 aa19.11■□□□□ 0.65
NEK9-211ENST00000557673 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.1■□□□□ 0.65
NEK9-211ENST00000557673 GOLGA8BA8MQT2 603 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 GPR37L1O60883 481 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 RGS20O76081 388 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 ZNF200P98182 395 aaPredicted RBP19.1■□□□□ 0.65
NEK9-211ENST00000557673 APOBRQ0VD83 1088 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 PGM5Q15124 567 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 PTPROQ16827 1216 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 HSDL1Q3SXM5 330 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 FBXO22Q8NEZ5 403 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 SAMD11Q96NU1 681 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 SPZ1Q9BXG8 430 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 PDRG1Q9NUG6 133 aa19.1■□□□□ 0.65
NEK9-211ENST00000557673 C17orf102A2RUQ5 167 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms