RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
VIPAS39-211ENST00000557658 KIAA0753Q2KHM9 967 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 SLC10A5Q5PT55 438 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 EIF1ADQ8N9N8 165 aaKnown RBP13□□□□□ -0.33
VIPAS39-211ENST00000557658 USP38Q8NB14 1042 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 CEP63Q96MT8 703 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
VIPAS39-211ENST00000557658 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 CES2O00748 559 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 RAD51CO43502 376 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 ZPR1O75312 459 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 GNA14O95837 355 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 FNTAP49354 379 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 GSTO1P78417 241 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 RAPGEF1Q13905 1077 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 SEPT2Q15019 361 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 LRIG3Q6UXM1 1119 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 NLRP14Q86W24 1093 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 ACSBG1Q96GR2 724 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 CABS1Q96KC9 395 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 PIGSQ96S52 555 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 MYCBPQ99417 103 aaPredicted RBP13□□□□□ -0.33
VIPAS39-211ENST00000557658 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
VIPAS39-211ENST00000557658 TMEM260Q9NX78 707 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 PLAAQ9Y263 795 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
VIPAS39-211ENST00000557658 MYH4Q9Y623 1939 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 hCG_1984214I3L0E3 225 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 TMEM119Q4V9L6 283 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 ZCWPW2Q504Y3 356 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 USP17L2Q6R6M4 530 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 ZNF713Q8N859 430 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 GLIS3Q8NEA6 775 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 CCT8L2Q96SF2 557 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 ISCUQ9H1K1 167 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 PLCB1Q9NQ66 1216 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 GGA2Q9UJY4 613 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 POTEMA6NI47 508 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 MYBP10242 640 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 RNASE9P60153 205 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 KLHL30Q0D2K2 578 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 COASYQ13057 564 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 ITGB3BPQ13352 177 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 ASIC2Q16515 512 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 KLHL7Q8IXQ5 586 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 WDR66Q8TBY9 1149 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 MYCBPAPQ8TBZ2 947 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 EYA3Q99504 573 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 TMBIM4Q9HC24 238 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 POLD4Q9HCU8 107 aa12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 PACSIN2Q9UNF0 486 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.99□□□□□ -0.33
VIPAS39-211ENST00000557658 ROBO1Q9Y6N7 1651 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 A0A087X0T9 212 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 SLC37A4O43826 429 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 FAM107AO95990 144 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 FAM228BP0C875 321 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 PPP4CP60510 307 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 CUL1Q13616 776 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 RPS6KA1Q15418 735 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 AIPL1Q9NZN9 384 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 TMEM59LQ9UK28 342 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 BTNL10A8MVZ5 291 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 TDP2O95551 362 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 ADCY7P51828 1080 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 ARID5AQ03989 594 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 TRADDQ15628 312 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 C10orf76Q5T2E6 689 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 RNF187Q5TA31 235 aaPredicted RBP12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 KCNK18Q7Z418 384 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 TXNRD3Q86VQ6 643 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 TRIM59Q8IWR1 403 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 LRRC45Q96CN5 670 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 DNAJC19Q96DA6 116 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 PBKQ96KB5 322 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 PANK4Q9NVE7 773 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 ADAMTS1Q9UHI8 967 aa12.98□□□□□ -0.33
VIPAS39-211ENST00000557658 E7EVH7 732 aa12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 GCOM1H8Y6P7 765 aaPredicted RBP12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 MYO1FO00160 1098 aa12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 KCNK3O14649 394 aa12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 LDHCP07864 332 aa12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 EPS15P42566 896 aa12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 SEC24CP53992 1094 aa12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 MARSP56192 900 aaKnown RBP12.97□□□□□ -0.33
VIPAS39-211ENST00000557658 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms