RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 PAK1Q13153 545 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 HABP4Q5JVS0 413 aaKnown RBP7.53□□□□□ -1.2
GPHN-215ENST00000557654 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 ZC3H18Q86VM9 953 aaKnown RBP7.53□□□□□ -1.2
GPHN-215ENST00000557654 ZSWIM2Q8NEG5 633 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 PCDH19Q8TAB3 1148 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 FEZF2Q8TBJ5 459 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 TOE1Q96GM8 510 aaKnown RBP7.53□□□□□ -1.2
GPHN-215ENST00000557654 MRFAP1L1Q96HT8 127 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 KCNC2Q96PR1 638 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 CD244Q9BZW8 370 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 ZCCHC4Q9H5U6 513 aa7.53□□□□□ -1.2
GPHN-215ENST00000557654 RASGRP1O95267 797 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 PYGMP11217 842 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 SPIRE1Q08AE8 756 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 TUSC3Q13454 348 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 SQSTM1Q13501 440 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 LIPIQ6XZB0 460 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 LINC00482Q8N8I6 264 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 UHMK1Q8TAS1 419 aaKnown RBP7.52□□□□□ -1.21
GPHN-215ENST00000557654 SH3RF2Q8TEC5 729 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 ZSWIM3Q96MP5 696 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 SPATA25Q9BR10 227 aa7.52□□□□□ -1.21
GPHN-215ENST00000557654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.51□□□□□ -1.21
GPHN-215ENST00000557654 ARVCFO00192 962 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 MAFKO60675 156 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 NKX3-2P78367 333 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 TMC5Q6UXY8 1006 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 PHOSPHO1Q8TCT1 267 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 SH3TC2Q8TF17 1288 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 SCLYQ96I15 445 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 DSEQ9UL01 958 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 CBLCQ9ULV8 474 aa7.51□□□□□ -1.21
GPHN-215ENST00000557654 KCNK3O14649 394 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 SLURP1P55000 103 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 CAP1Q01518 475 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 ADAM9Q13443 819 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 ZC3H12BQ5HYM0 836 aaKnown RBP7.5□□□□□ -1.21
GPHN-215ENST00000557654 CYP4F22Q6NT55 531 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 BRAPQ7Z569 592 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 FGD2Q7Z6J4 655 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 ZDHHC14Q8IZN3 488 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 KYQ8NBH2 561 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 GSTCDQ8NEC7 633 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 PARD6AQ9NPB6 346 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 CATSPERZQ9NTU4 200 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 SFMBT1Q9UHJ3 866 aa7.5□□□□□ -1.21
GPHN-215ENST00000557654 SH3D21A4FU49 640 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 OTOL1A6NHN0 477 aaPredicted RBP7.49□□□□□ -1.21
GPHN-215ENST00000557654 RAPGEF3O95398 923 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 KRT15P19012 456 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 HOXA5P20719 270 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 THBS2P35442 1172 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 DNM2P50570 870 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 RTP5Q14D33 572 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 PHF19Q5T6S3 580 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 TTLL10Q6ZVT0 673 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 OSTM1Q86WC4 334 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 ZC3H7AQ8IWR0 971 aaKnown RBP7.49□□□□□ -1.21
GPHN-215ENST00000557654 FBXW5Q969U6 566 aa7.49□□□□□ -1.21
GPHN-215ENST00000557654 NCOA5Q9HCD5 579 aaKnown RBP7.49□□□□□ -1.21
GPHN-215ENST00000557654 WNT9AO14904 365 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 SMARCA5O60264 1052 aaPredicted RBP7.48□□□□□ -1.21
GPHN-215ENST00000557654 AMY2AP04746 511 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 PDE6AP16499 860 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 AMY2BP19961 511 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 TRIM61Q5EBN2 209 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 ARHGAP36Q6ZRI8 547 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 KCTD1Q719H9 257 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.48□□□□□ -1.21
GPHN-215ENST00000557654 PROSER1Q86XN7 944 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 PTRH1Q86Y79 214 aaKnown RBP7.48□□□□□ -1.21
GPHN-215ENST00000557654 CARFQ8N187 725 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 CISD2Q8N5K1 135 aaKnown RBP7.48□□□□□ -1.21
GPHN-215ENST00000557654 XYLT2Q9H1B5 865 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 COQ6Q9Y2Z9 468 aa7.48□□□□□ -1.21
GPHN-215ENST00000557654 CCDC66A2RUB6 948 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 ACOT7O00154 380 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 JAM2P57087 298 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 ST5P78524 1137 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
GPHN-215ENST00000557654 TRIM48Q8IWZ4 208 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 TTLL11Q8NHH1 800 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 C20orf173Q96LM9 149 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 CLUHP3Q96NS8 147 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 MRPL4Q9BYD3 311 aaKnown RBP7.47□□□□□ -1.21
GPHN-215ENST00000557654 TRIM39Q9HCM9 518 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 LUC7LQ9NQ29 371 aaKnown RBP7.47□□□□□ -1.21
GPHN-215ENST00000557654 NTMQ9P121 344 aa7.47□□□□□ -1.21
GPHN-215ENST00000557654 A0A0G2JLL6 359 aaPredicted RBP7.46□□□□□ -1.22
GPHN-215ENST00000557654 ESYT3A0FGR9 886 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 MAN2B1O00754 1011 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 PPP1R12AO14974 1030 aaPredicted RBP7.46□□□□□ -1.22
GPHN-215ENST00000557654 EFCAB14O75071 495 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 SASH1O94885 1247 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 CKMP06732 381 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 FAHP16930 419 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 KCNC1P48547 511 aa7.46□□□□□ -1.22
GPHN-215ENST00000557654 SARSP49591 514 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms