RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 BORAQ6PGQ7 559 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 OTOP3Q7RTS5 596 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 TRIM48Q8IWZ4 208 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 LRRC47Q8N1G4 583 aaKnown RBP6.75□□□□□ -1.33
VRK1-207ENST00000557352 BORCS6Q96GS4 357 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 TMEM209Q96SK2 561 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 RBPJLQ9UBG7 517 aa6.75□□□□□ -1.33
VRK1-207ENST00000557352 TRAV20A0A0B4J274 112 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 BLACEA4D250 179 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 GRK2P25098 689 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 GRK3P35626 688 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 GRIN1Q05586 938 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 ZNF827Q17R98 1081 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 KIZQ2M2Z5 673 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 TMC5Q6UXY8 1006 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 PROSER1Q86XN7 944 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 RBM12BQ8IXT5 1001 aaKnown RBP6.74□□□□□ -1.33
VRK1-207ENST00000557352 TTLL11Q8NHH1 800 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 CLEC4DQ8WXI8 215 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 YTHDC1Q96MU7 727 aaKnown RBP6.74□□□□□ -1.33
VRK1-207ENST00000557352 ZFYVE21Q9BQ24 234 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 L2HGDHQ9H9P8 463 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 CROTQ9UKG9 612 aa6.74□□□□□ -1.33
VRK1-207ENST00000557352 CYP7B1O75881 506 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 STK10O94804 968 aaKnown RBP6.73□□□□□ -1.33
VRK1-207ENST00000557352 CYP1A1P04798 512 aaPredicted RBP6.73□□□□□ -1.33
VRK1-207ENST00000557352 COL6A2P12110 1019 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 INSRRP14616 1297 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 MAGEA10P43363 369 aaPredicted RBP6.73□□□□□ -1.33
VRK1-207ENST00000557352 GPR85P60893 370 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 IFRD2Q12894 506 aaPredicted RBP6.73□□□□□ -1.33
VRK1-207ENST00000557352 STYK1Q6J9G0 422 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 IFNL3Q8IZI9 196 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 ZCCHC14Q8WYQ9 949 aaKnown RBP6.73□□□□□ -1.33
VRK1-207ENST00000557352 ZNF669Q96BR6 464 aaPredicted RBP6.73□□□□□ -1.33
VRK1-207ENST00000557352 WRNIP1Q96S55 665 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 KCNJ15Q99712 375 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 MSRB2Q9Y3D2 182 aa6.73□□□□□ -1.33
VRK1-207ENST00000557352 E9PSI1 815 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 B4GALT3O60512 393 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 ZC3H6P61129 1189 aaKnown RBP6.72□□□□□ -1.33
VRK1-207ENST00000557352 SPIRE1Q08AE8 756 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 TUSC3Q13454 348 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 HABP4Q5JVS0 413 aaKnown RBP6.72□□□□□ -1.33
VRK1-207ENST00000557352 SPATC1Q76KD6 591 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 UHMK1Q8TAS1 419 aaKnown RBP6.72□□□□□ -1.33
VRK1-207ENST00000557352 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.72□□□□□ -1.33
VRK1-207ENST00000557352 MBD6Q96DN6 1003 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 SPATA9Q9BWV2 254 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 SSBP3Q9BWW4 388 aaPredicted RBP6.72□□□□□ -1.33
VRK1-207ENST00000557352 TMEM168Q9H0V1 697 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 SMPD4Q9NXE4 827 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 ASXL2Q76L83 1435 aa6.72□□□□□ -1.33
VRK1-207ENST00000557352 NKRFO15226 690 aaKnown RBP eCLIP6.71□□□□□ -1.34
VRK1-207ENST00000557352 LTFP02788 710 aa6.71□□□□□ -1.34
VRK1-207ENST00000557352 SOD2P04179 222 aa6.71□□□□□ -1.34
VRK1-207ENST00000557352 GNAT1P11488 350 aa6.71□□□□□ -1.34
VRK1-207ENST00000557352 NAALADL2Q58DX5 795 aa6.71□□□□□ -1.34
VRK1-207ENST00000557352 PDGFDQ9GZP0 370 aaPredicted RBP6.71□□□□□ -1.34
VRK1-207ENST00000557352 TELO2Q9Y4R8 837 aa6.71□□□□□ -1.34
VRK1-207ENST00000557352 ZNF536O15090 1300 aa6.71□□□□□ -1.34
VRK1-207ENST00000557352 COL6A1P12109 1028 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 ADAM17P78536 824 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 PAN2Q504Q3 1202 aaKnown RBP6.7□□□□□ -1.34
VRK1-207ENST00000557352 VASNQ6EMK4 673 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 TRMT10BQ6PF06 316 aaKnown RBP6.7□□□□□ -1.34
VRK1-207ENST00000557352 DTX3Q8N9I9 347 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 SAMD11Q96NU1 681 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 GPR20Q99678 358 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 IPPKQ9H8X2 491 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 MYRFQ9Y2G1 1151 aa6.7□□□□□ -1.34
VRK1-207ENST00000557352 FAM47E-STBD1D6RA91 191 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 U2SURPO15042 1029 aaKnown RBP6.69□□□□□ -1.34
VRK1-207ENST00000557352 PDPK1O15530 556 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 ADCY3O60266 1144 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 FAHP16930 419 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 PUM1Q14671 1186 aaKnown RBP eCLIP6.69□□□□□ -1.34
VRK1-207ENST00000557352 SURF1Q15526 300 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 PHF19Q5T6S3 580 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 PKN3Q6P5Z2 889 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 DPH6Q7L8W6 267 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 LIMS2Q7Z4I7 341 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 PLEKHH3Q7Z736 793 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 LOXL4Q96JB6 756 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 DLL4Q9NR61 685 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 FTSJ1Q9UET6 329 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 DSEQ9UL01 958 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 TRAF6Q9Y4K3 522 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 NUB1Q9Y5A7 615 aa6.69□□□□□ -1.34
VRK1-207ENST00000557352 LAMTOR5O43504 91 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 CKMP06732 381 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 EPHA5P54756 1037 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 RASGRF1Q13972 1273 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 GLB1LQ6UWU2 654 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.68□□□□□ -1.34
VRK1-207ENST00000557352 KLHL36Q8N4N3 616 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms