RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MUC3AQ02505 3323 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 SPATA31C2B4DYI2 1134 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 NBNO60934 754 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 CXCL10P02778 98 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 WDR5P61964 334 aaKnown RBP16.3■□□□□ 0.2
SNX6-210ENST00000557341 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
SNX6-210ENST00000557341 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 CYFIP1Q7L576 1253 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 PPM1EQ8WY54 764 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 WNT8BQ93098 351 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 USP26Q9BXU7 913 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 PSTPIP2Q9H939 334 aa16.3■□□□□ 0.2
SNX6-210ENST00000557341 ZNF215Q9UL58 517 aaPredicted RBP16.3■□□□□ 0.2
SNX6-210ENST00000557341 PRRC2BQ5JSZ5 2229 aaKnown RBP16.29■□□□□ 0.2
SNX6-210ENST00000557341 EMSYQ7Z589 1322 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 C17orf102A2RUQ5 167 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 CDC45O75419 566 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 ZNF200P98182 395 aaPredicted RBP16.29■□□□□ 0.2
SNX6-210ENST00000557341 GPNMBQ14956 572 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 ZNF618Q5T7W0 954 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 APOA5Q6Q788 366 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 SERINC5Q86VE9 423 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 NEK1Q96PY6 1258 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 GPR20Q99678 358 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 SENP7Q9BQF6 1050 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 BCAS3Q9H6U6 928 aa16.29■□□□□ 0.2
SNX6-210ENST00000557341 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 MYH9P35579 1960 aaKnown RBP16.28■□□□□ 0.2
SNX6-210ENST00000557341 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 TLL1O43897 1013 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 EFCAB14O75071 495 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 SMIM10L2AP0DMW4 78 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 SMIM10L2BP0DMW5 78 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 HOXC8P31273 242 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 HIC1Q14526 733 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 TRAF7Q6Q0C0 670 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 GIMAP8Q8ND71 665 aaPredicted RBP16.28■□□□□ 0.2
SNX6-210ENST00000557341 SYMPKQ92797 1274 aaKnown RBP16.28■□□□□ 0.2
SNX6-210ENST00000557341 ATP6V0A1Q93050 837 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 GPRASP2Q96D09 838 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 CDHR1Q96JP9 859 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
SNX6-210ENST00000557341 THEGQ9P2T0 379 aa16.28■□□□□ 0.2
SNX6-210ENST00000557341 TTC28Q96AY4 2481 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 ABHD14A-ACY1A0A1B0GW23 586 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 GNAT1P11488 350 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 THPOP40225 353 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 DEFB103AP81534 67 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 SP4Q02446 784 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 KRT32Q14532 448 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 UBE2SQ16763 222 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 TJAP1Q5JTD0 557 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 TRIM50Q86XT4 487 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.2
SNX6-210ENST00000557341 TCF20Q9UGU0 1960 aaKnown RBP16.26■□□□□ 0.19
SNX6-210ENST00000557341 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 TREHO43280 583 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 ZBTB43O43298 467 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 CAND2O75155 1236 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 LGR5O75473 907 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 TAP1Q03518 808 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 MTMR1Q13613 665 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 IKBKEQ14164 716 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 MBTPS1Q14703 1052 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
SNX6-210ENST00000557341 RTN1Q16799 776 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 PPP1R18Q6NYC8 613 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 DHX32Q7L7V1 743 aaKnown RBP16.26■□□□□ 0.19
SNX6-210ENST00000557341 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 CERS4Q9HA82 394 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 PRDM6Q9NQX0 595 aa16.26■□□□□ 0.19
SNX6-210ENST00000557341 COL4A6Q14031 1691 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 GTPBP6O43824 516 aaPredicted RBP16.25■□□□□ 0.19
SNX6-210ENST00000557341 KCNA2P16389 499 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 TCTN1Q2MV58 587 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 UTP14CQ5TAP6 766 aaKnown RBP16.25■□□□□ 0.19
SNX6-210ENST00000557341 WWC2Q6AWC2 1192 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 MICALL1Q8N3F8 863 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
SNX6-210ENST00000557341 ARNTL2Q8WYA1 636 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 RNPEPQ9H4A4 650 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 PCDHA6Q9UN73 950 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 PCDHA8Q9Y5H6 950 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 ATG2AQ2TAZ0 1938 aa16.25■□□□□ 0.19
SNX6-210ENST00000557341 hCG_1984214I3L0E3 225 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 ARHGEF15O94989 841 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 GJB5O95377 273 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
SNX6-210ENST00000557341 ITGB5P18084 799 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 TCF7P36402 384 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms