RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
LINC00640-204ENST00000557295 FANCIQ9NVI1 1328 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 A0A1B0GUL6 1792 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 EYA2O00167 538 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 PEX10O60683 326 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 HOXC6P09630 235 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 CDC27P30260 824 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 CDC25BP30305 580 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 RHBDL3P58872 404 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 ERVK-24P63145 666 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 AKNAD1Q5T1N1 836 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 SLC39A5Q6ZMH5 540 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 SLCO4C1Q6ZQN7 724 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 SV2BQ7L1I2 683 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 CCAR1Q8IX12 1150 aaKnown RBP8.33□□□□□ -1.08
LINC00640-204ENST00000557295 ZGPATQ8N5A5 531 aaKnown RBP8.33□□□□□ -1.08
LINC00640-204ENST00000557295 ARRDC4Q8NCT1 418 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 KLHDC4Q8TBB5 520 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 EDC3Q96F86 508 aaKnown RBP8.33□□□□□ -1.08
LINC00640-204ENST00000557295 UHRF1Q96T88 793 aaPredicted RBP8.33□□□□□ -1.08
LINC00640-204ENST00000557295 NOC4LQ9BVI4 516 aaKnown RBP8.33□□□□□ -1.08
LINC00640-204ENST00000557295 C1QTNF1Q9BXJ1 281 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 TGIF2Q9GZN2 237 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 CAPN10Q9HC96 672 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 PDLIM7Q9NR12 457 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 TMOD4Q9NZQ9 345 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 DENND2AQ9ULE3 1009 aa8.33□□□□□ -1.08
LINC00640-204ENST00000557295 GPR75-ASB3A0A0A6YYF3 556 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 SLC15A5A6NIM6 579 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 C19orf81C9J6K1 198 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 LILRB5O75023 590 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 GLRX3O76003 335 aaKnown RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 MAP4K4O95819 1239 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 BTDP43251 543 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 ARL4DP49703 201 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 MRPS5P82675 430 aaKnown RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 PICALMQ13492 652 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 RRP1BQ14684 758 aaKnown RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 TRIM60Q495X7 471 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 RPS26P11Q5JNZ5 115 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 SLC4A10Q6U841 1118 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 IL22RA1Q8N6P7 574 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 C3orf58Q8NDZ4 430 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 EDARADDQ8WWZ3 215 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 TRIM43Q96BQ3 446 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 RNPC3Q96LT9 517 aaKnown RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 CLEC4MQ9H2X3 399 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 PRDM5Q9NQX1 630 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 FLRT1Q9NZU1 646 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 THEGQ9P2T0 379 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 HERC5Q9UII4 1024 aaKnown RBP8.32□□□□□ -1.08
LINC00640-204ENST00000557295 TRIM33Q9UPN9 1127 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
LINC00640-204ENST00000557295 MROH7-TTC4A0A0A0MT08 1334 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 PDS5AQ29RF7 1337 aaKnown RBP8.31□□□□□ -1.08
LINC00640-204ENST00000557295 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-204ENST00000557295 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-204ENST00000557295 MINDY4BA8MYZ0 360 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 KBTBD13C9JR72 458 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 EPXP11678 715 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 ITPKAP23677 461 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 CNGA1P29973 690 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 RFX5P48382 616 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-204ENST00000557295 EPHB4P54760 987 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 PCDH1Q08174 1060 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 IKBKEQ14164 716 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 NAALADL2Q58DX5 795 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 KANK3Q6NY19 840 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 DZIP1Q86YF9 867 aaKnown RBP8.31□□□□□ -1.08
LINC00640-204ENST00000557295 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 MUC3BQ9H195 1237 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 ZNF576Q9H609 170 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 SH2B1Q9NRF2 756 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-204ENST00000557295 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 NAGPAQ9UK23 515 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 PCDHGB7Q9Y5F8 929 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 TACC3Q9Y6A5 838 aa8.31□□□□□ -1.08
LINC00640-204ENST00000557295 BDP1A6H8Y1 2624 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 ASNSP08243 561 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 CYBAP13498 195 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 ITGB8P26012 769 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 CYP2C19P33261 490 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 PHKA1P46020 1223 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 CCNA1P78396 465 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 EXOSC9Q06265 439 aaKnown RBP8.3□□□□□ -1.08
LINC00640-204ENST00000557295 ATP2B3Q16720 1220 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 GJC2Q5T442 439 aaPredicted RBP8.3□□□□□ -1.08
LINC00640-204ENST00000557295 SPTY2D1Q68D10 685 aaPredicted RBP8.3□□□□□ -1.08
LINC00640-204ENST00000557295 METTL16Q86W50 562 aaKnown RBP8.3□□□□□ -1.08
LINC00640-204ENST00000557295 TRPV1Q8NER1 839 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 TIFAQ96CG3 184 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 GINM1Q9NU53 330 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 RABGAP1Q9Y3P9 1069 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 MGAMO43451 1857 aa8.3□□□□□ -1.08
LINC00640-204ENST00000557295 KIAA0355O15063 1070 aa8.29□□□□□ -1.08
LINC00640-204ENST00000557295 EIF4EBP3O60516 100 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms