RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GTPBP6O43824 516 aaPredicted RBP18.31■□□□□ 0.52
TUBB3-213ENST00000557262 LGALS2P05162 132 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 CALM1P0DP23 149 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 CALM2P0DP24 149 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 CALM3P0DP25 149 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 PCNX4Q63HM2 1172 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 CREB3L3Q68CJ9 461 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 METTL7BQ6UX53 244 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 SERINC5Q86VE9 423 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 MICALL1Q8N3F8 863 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 ARNTL2Q8WYA1 636 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 ATP6V0A1Q93050 837 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 SENP7Q9BQF6 1050 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 MTCH2Q9Y6C9 303 aa18.31■□□□□ 0.52
TUBB3-213ENST00000557262 RSPH10B2B2RC85 870 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 ARHGEF15O94989 841 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 RSPH10BP0C881 870 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 SMIM10L2AP0DMW4 78 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 SMIM10L2BP0DMW5 78 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 THPOP40225 353 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 DEFB103AP81534 67 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 TCTN1Q2MV58 587 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 NLRX1Q86UT6 975 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 GPR20Q99678 358 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 SLC12A7Q9Y666 1083 aa18.3■□□□□ 0.52
TUBB3-213ENST00000557262 REV3LO60673 3130 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 EMSYQ7Z589 1322 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 EPOPA6NHQ4 379 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 LGR5O75473 907 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 HOXC8P31273 242 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 COL9A3Q14050 684 aaPredicted RBP18.29■□□□□ 0.52
TUBB3-213ENST00000557262 MBTPS1Q14703 1052 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 TMCO2Q7Z6W1 182 aaPredicted RBP18.29■□□□□ 0.52
TUBB3-213ENST00000557262 CMTR1Q8N1G2 835 aaKnown RBP18.29■□□□□ 0.52
TUBB3-213ENST00000557262 GIMAP8Q8ND71 665 aaPredicted RBP18.29■□□□□ 0.52
TUBB3-213ENST00000557262 RAD9AQ99638 391 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 PSTPIP2Q9H939 334 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 TRANK1O15050 2925 aa18.29■□□□□ 0.52
TUBB3-213ENST00000557262 MUC3AQ02505 3323 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 TNFRSF10AO00220 468 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 TREHO43280 583 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 GJB5O95377 273 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 GNAT1P11488 350 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 RXRAP19793 462 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 FANCBQ8NB91 859 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 DBF4BQ8NFT6 615 aa18.28■□□□□ 0.52
TUBB3-213ENST00000557262 LCHNA4D1U4 455 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 SKIV2LQ15477 1246 aaKnown RBP18.27■□□□□ 0.52
TUBB3-213ENST00000557262 UTP14CQ5TAP6 766 aaKnown RBP18.27■□□□□ 0.52
TUBB3-213ENST00000557262 RNF20Q5VTR2 975 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 SYNE3Q6ZMZ3 975 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 CCDC82Q8N4S0 544 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 IL27Q8NEV9 243 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 GPRASP2Q96D09 838 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 LRRC2Q9BYS8 371 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 SETD4Q9NVD3 440 aa18.27■□□□□ 0.52
TUBB3-213ENST00000557262 ZNF215Q9UL58 517 aaPredicted RBP18.27■□□□□ 0.52
TUBB3-213ENST00000557262 CAND2O75155 1236 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 GRB10Q13322 594 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 AAK1Q2M2I8 961 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 PLEKHG4Q58EX7 1191 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 SGMS1Q86VZ5 419 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 RAB11FIP4Q86YS3 637 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 TELO2Q9Y4R8 837 aa18.26■□□□□ 0.51
TUBB3-213ENST00000557262 hCG_1642624A0A1W2PR95 340 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 ATP9AO75110 1047 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 SP4Q02446 784 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 KRT40Q6A162 431 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.25■□□□□ 0.51
TUBB3-213ENST00000557262 TMTC3Q6ZXV5 915 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 SPRED2Q7Z698 418 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 ADAMTS19Q8TE59 1207 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 LMCD1Q9NZU5 365 aa18.25■□□□□ 0.51
TUBB3-213ENST00000557262 PRRC2BQ5JSZ5 2229 aaKnown RBP18.25■□□□□ 0.51
TUBB3-213ENST00000557262 XIRP2A4UGR9 3374 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 SPDYE3A6NKU9 549 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 MAFGO15525 162 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 LPXNO60711 386 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 AMHP03971 560 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 BMP1P13497 986 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 ITGB5P18084 799 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 ERVK-21P61565 698 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 ADAM17P78536 824 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 FAM117BQ6P1L5 589 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 TRIM50Q86XT4 487 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 SEPT1Q8WYJ6 367 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 SEPT8Q92599 483 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 TGS1Q96RS0 853 aaKnown RBP18.24■□□□□ 0.51
TUBB3-213ENST00000557262 PCDHA6Q9UN73 950 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 COG5Q9UP83 839 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 INSL6Q9Y581 213 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 PCDHA8Q9Y5H6 950 aa18.24■□□□□ 0.51
TUBB3-213ENST00000557262 UBIAD1Q9Y5Z9 338 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms