RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 C17orf102A2RUQ5 167 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 RSPH10B2B2RC85 870 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 RSPH10BP0C881 870 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 SMIM10L2AP0DMW4 78 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 SMIM10L2BP0DMW5 78 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 THPOP40225 353 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 ANTXR2P58335 489 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 SEMA3FQ13275 785 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 SART3Q15020 963 aaKnown RBP16.68■□□□□ 0.26
VRTN-202ENST00000557177 GNPTABQ3T906 1256 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.68■□□□□ 0.26
VRTN-202ENST00000557177 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
VRTN-202ENST00000557177 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 ATP6V0A1Q93050 837 aa16.68■□□□□ 0.26
VRTN-202ENST00000557177 TGS1Q96RS0 853 aaKnown RBP16.68■□□□□ 0.26
VRTN-202ENST00000557177 BRWD1Q9NSI6 2320 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 SPATA31C2B4DYI2 1134 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 SGSM2O43147 1006 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 PLEKHG4Q58EX7 1191 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 METTL7BQ6UX53 244 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
VRTN-202ENST00000557177 DBF4BQ8NFT6 615 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 MAP3K14Q99558 947 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 RNPEPQ9H4A4 650 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 MTUS1Q9ULD2 1270 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 INSL6Q9Y581 213 aa16.67■□□□□ 0.26
VRTN-202ENST00000557177 COL4A6Q14031 1691 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 TREHO43280 583 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 CAND2O75155 1236 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 HTRA4P83105 476 aaPredicted RBP16.66■□□□□ 0.26
VRTN-202ENST00000557177 NEDD9Q14511 834 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 FAM117BQ6P1L5 589 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 SP7Q8TDD2 431 aaPredicted RBP16.66■□□□□ 0.26
VRTN-202ENST00000557177 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 GPR20Q99678 358 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 SPZ1Q9BXG8 430 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 USP26Q9BXU7 913 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 RAPGEFL1Q9UHV5 662 aa16.66■□□□□ 0.26
VRTN-202ENST00000557177 PIK3CDO00329 1044 aa16.65■□□□□ 0.26
VRTN-202ENST00000557177 NOP56O00567 594 aaKnown RBP16.65■□□□□ 0.26
VRTN-202ENST00000557177 FIBPO43427 364 aa16.65■□□□□ 0.26
VRTN-202ENST00000557177 AMHP03971 560 aa16.65■□□□□ 0.26
VRTN-202ENST00000557177 CYFIP1Q7L576 1253 aa16.65■□□□□ 0.26
VRTN-202ENST00000557177 LY9Q9HBG7 655 aa16.65■□□□□ 0.26
VRTN-202ENST00000557177 MEIS2O14770 477 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 SMARCA1P28370 1054 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 ADAM17P78536 824 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 XRRA1Q6P2D8 792 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 ZNF654Q8IZM8 581 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 MYOCDQ8IZQ8 938 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 SENP7Q9BQF6 1050 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 C17orf80Q9BSJ5 609 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 C1QTNF1Q9BXJ1 281 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 OSBPL7Q9BZF2 842 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 RTEL1Q9NZ71 1219 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 TELO2Q9Y4R8 837 aa16.64■□□□□ 0.25
VRTN-202ENST00000557177 DDAH1O94760 285 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 GNAT1P11488 350 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 USP17L6PQ6QN14 398 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 FBXO22Q8NEZ5 403 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
VRTN-202ENST00000557177 SEPT8Q92599 483 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 TOP1MTQ969P6 601 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
VRTN-202ENST00000557177 MTA3Q9BTC8 594 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 MYL10Q9BUA6 226 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 SETD4Q9NVD3 440 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 ZNF215Q9UL58 517 aaPredicted RBP16.63■□□□□ 0.25
VRTN-202ENST00000557177 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
VRTN-202ENST00000557177 NLRC5Q86WI3 1866 aa16.63■□□□□ 0.25
VRTN-202ENST00000557177 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
VRTN-202ENST00000557177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
VRTN-202ENST00000557177 CTSHP09668 335 aa16.62■□□□□ 0.25
VRTN-202ENST00000557177 KIF5BP33176 963 aa16.62■□□□□ 0.25
VRTN-202ENST00000557177 FAM26DQ5JW98 314 aa16.62■□□□□ 0.25
VRTN-202ENST00000557177 SMARCC2Q8TAQ2 1214 aa16.62■□□□□ 0.25
VRTN-202ENST00000557177 LMBR1Q8WVP7 490 aa16.62■□□□□ 0.25
VRTN-202ENST00000557177 UBE2ZQ9H832 354 aaPredicted RBP16.62■□□□□ 0.25
VRTN-202ENST00000557177 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
VRTN-202ENST00000557177 RALGAPA2Q2PPJ7 1873 aa16.61■□□□□ 0.25
VRTN-202ENST00000557177 SRBD1Q8N5C6 995 aaKnown RBP16.61■□□□□ 0.25
VRTN-202ENST00000557177 CUL5Q93034 780 aa16.61■□□□□ 0.25
VRTN-202ENST00000557177 LZTS2Q9BRK4 669 aa16.61■□□□□ 0.25
VRTN-202ENST00000557177 SEC63Q9UGP8 760 aaKnown RBP16.61■□□□□ 0.25
VRTN-202ENST00000557177 KAT6AQ92794 2004 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
VRTN-202ENST00000557177 PRC1O43663 620 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 PLEKHA8P1O95397 391 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 KCNA2P16389 499 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 ARHGAP4P98171 946 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 COL9A3Q14050 684 aaPredicted RBP16.6■□□□□ 0.25
VRTN-202ENST00000557177 EPC2Q52LR7 807 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
VRTN-202ENST00000557177 CASC1Q6TDU7 716 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
VRTN-202ENST00000557177 NLRX1Q86UT6 975 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms