RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 CCNT1O60563 726 aaKnown RBP16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 C9orf50Q5SZB4 431 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 ATL3Q6DD88 541 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 SH3RF1Q7Z6J0 888 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 PLA2G4DQ86XP0 818 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 BADQ92934 168 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 ZNF396Q96N95 335 aaPredicted RBP16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 RTEL1Q9NZ71 1219 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 ZDHHC9Q9Y397 364 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 CDH23Q9H251 3354 aa16.17■□□□□ 0.18
NME1-NME2-203ENST00000555572 IGLV3-22A0A075B6J6 115 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 FAM86B1E9PN63 330 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 EDIL3O43854 480 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 RGS20O76081 388 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 TDP2O95551 362 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 BMP15O95972 392 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 FAM86B2P0C5J1 330 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 ZNF865P0CJ78 1059 aaPredicted RBP16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 ITGB5P18084 799 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 TLE2Q04725 743 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 MTMR1Q13613 665 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 TTLL4Q14679 1199 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 IQSEC1Q6DN90 963 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 TAPT1Q6NXT6 567 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 EEPD1Q7L9B9 569 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 FBXO16Q8IX29 292 aaPredicted RBP16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 FERMT2Q96AC1 680 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 SEMA6BQ9H3T3 888 aa16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 DDX25Q9UHL0 483 aaKnown RBP16.16■□□□□ 0.18
NME1-NME2-203ENST00000555572 SPATA31C2B4DYI2 1134 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 TBX3O15119 743 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 ATP2B1P20020 1258 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 TOB1P50616 345 aaPredicted RBP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 PRR16Q569H4 304 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 FOXD4L5Q5VV16 416 aaPredicted RBP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 SEPT14Q6ZU15 432 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 GIMAP8Q8ND71 665 aaPredicted RBP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 FOXD4L4Q8WXT5 416 aaPredicted RBP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 TTC28Q96AY4 2481 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 SENP7Q9BQF6 1050 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 COL25A1Q9BXS0 654 aaPredicted RBP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 WDR11Q9BZH6 1224 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 FAM184BQ9ULE4 1060 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 CEP131Q9UPN4 1083 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 DDX49Q9Y6V7 483 aaKnown RBP16.15■□□□□ 0.18
NME1-NME2-203ENST00000555572 LAD1O00515 517 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 NEMFO60524 1076 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 BAG4O95429 457 aaKnown RBP16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 RARBP10826 455 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 AKR1A1P14550 325 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 ITGB8P26012 769 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 MCM7P33993 719 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 SMAD3P84022 425 aaKnown RBP16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 ZNF697Q5TEC3 545 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 LENG9Q96B70 501 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 FAM20AQ96MK3 541 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 FAM161BQ96MY7 647 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 CDX2Q99626 313 aaPredicted RBP16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 XPNPEP3Q9NQH7 507 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 PRDM5Q9NQX1 630 aaPredicted RBP16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 KCNH7Q9NS40 1196 aa16.14■□□□□ 0.17
NME1-NME2-203ENST00000555572 ADAMTS4O75173 837 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 TXNP10599 105 aaKnown RBP16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 TNFAIP2Q03169 654 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 NEDD9Q14511 834 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 ZNF174Q15697 407 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 DUSP28Q4G0W2 176 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 CCDC62Q6P9F0 684 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 RNF180Q86T96 592 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 SLFN12Q8IYM2 578 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 CYP2W1Q8TAV3 490 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 ZNF577Q9BSK1 485 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 TSEN34Q9BSV6 310 aaKnown RBP16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 KCNMB3Q9NPA1 279 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 TBC1D22BQ9NU19 505 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 CFAP45Q9UL16 551 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 NFASCO94856 1347 aa16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 SPTBN5Q9NRC6 3674 aaKnown RBP16.13■□□□□ 0.17
NME1-NME2-203ENST00000555572 IPO5O00410 1097 aaKnown RBP16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 WNT7AO00755 349 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 MSH4O15457 936 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 SLC37A4O43826 429 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 MARCH6O60337 910 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 PGK1P00558 417 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 ARP10275 920 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 EPHB4P54760 987 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 CALCRLQ16602 461 aa16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 CCSAPQ6IQ19 270 aaPredicted RBP16.12■□□□□ 0.17
NME1-NME2-203ENST00000555572 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms