RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-228ENST00000554592 ARMC9Q7Z3E5 817 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 CCDC84Q86UT8 332 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-228ENST00000554592 RASGRP4Q8TDF6 673 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 NT5C1AQ9BXI3 368 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 MIR1-1HGQ9H1L0 117 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 R3HDMLQ9H3Y0 253 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 MYOZ2Q9NPC6 264 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 UBP1Q9NZI7 540 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 ANGEL1Q9UNK9 670 aaKnown RBP6.3□□□□□ -1.4
ATXN3-228ENST00000554592 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 BCORQ6W2J9 1755 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 F13A1P00488 732 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 CEACAM5P06731 702 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 HSP90B1P14625 803 aaKnown RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 CRKP46108 304 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 MMP14P50281 582 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 RPL6Q02878 288 aaKnown RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 ARID5AQ03989 594 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 BNIP3Q12983 259 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 PROSER3Q2NL68 480 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 XAGE3Q8WTP9 111 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 JARID2Q92833 1246 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 FAM89AQ96GI7 184 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 PCGF6Q9BYE7 350 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 GOLGA2P5Q9HBQ8 144 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 BABAM1Q9NWV8 329 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
ATXN3-228ENST00000554592 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-228ENST00000554592 MANSC4A6NHS7 340 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-228ENST00000554592 CILPO75339 1184 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 UFL1O94874 794 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 ANXA1P04083 346 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 TAL1P17542 331 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-228ENST00000554592 PPP2R1AP30153 589 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 NFE2L2Q16236 605 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 IFI16Q16666 785 aaKnown RBP6.28□□□□□ -1.4
ATXN3-228ENST00000554592 NBPF9Q3BBW0 867 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 HID1Q8IV36 788 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 MISP3Q96FF7 219 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 ERO1AQ96HE7 468 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 ISCA1Q9BUE6 129 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 TJP2Q9UDY2 1190 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 TSPYL4Q9UJ04 414 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 VAV3Q9UKW4 847 aa6.28□□□□□ -1.4
ATXN3-228ENST00000554592 WNT10BO00744 389 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 IRS4O14654 1257 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-228ENST00000554592 CST3P01034 146 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-228ENST00000554592 CD8BP10966 210 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 IRAK1P51617 712 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 ETF1P62495 437 aaKnown RBP6.27□□□□□ -1.41
ATXN3-228ENST00000554592 PRKCQQ04759 706 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 ARHGEF6Q15052 776 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 MCF2L2Q86YR7 1114 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
ATXN3-228ENST00000554592 MFSD2AQ8NA29 543 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 FLCNQ8NFG4 579 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 PLBD2Q8NHP8 589 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 PLEKHF1Q96S99 279 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 KRTAP9-9Q9BYP9 154 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 KRTAP9-4Q9BYQ2 154 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 GINM1Q9NU53 330 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 GTF2IRD1Q9UHL9 959 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 SCAF8Q9UPN6 1271 aaKnown RBP6.27□□□□□ -1.41
ATXN3-228ENST00000554592 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
ATXN3-228ENST00000554592 SIPA1L3O60292 1781 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-228ENST00000554592 ZNF609O15014 1411 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 H0YGN5 161 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 TLR3O15455 904 aaKnown RBP6.26□□□□□ -1.41
ATXN3-228ENST00000554592 FGRP09769 529 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-228ENST00000554592 CD96P40200 585 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 SP3Q02447 781 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 APOBRQ0VD83 1088 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 PRKG1Q13976 671 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 PRAMEF13Q5VWM6 474 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 C22orf34Q6ZV56 151 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 APOBEC3FQ8IUX4 373 aaKnown RBP6.26□□□□□ -1.41
ATXN3-228ENST00000554592 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
ATXN3-228ENST00000554592 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms