RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 C16orf70Q9BSU1 422 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 TUT1Q9H6E5 874 aaKnown RBP10□□□□□ -0.81
ACTN1-213ENST00000554508 BARHL2Q9NY43 387 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 UBIAD1Q9Y5Z9 338 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 NID2Q14112 1375 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 SMCO2A6NFE2 343 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 STXBP3O00186 592 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 PRPF3O43395 683 aaKnown RBP9.99□□□□□ -0.81
ACTN1-213ENST00000554508 SORBS3O60504 671 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 LGALS2P05162 132 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 SELPP16109 830 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 ADCY7P51828 1080 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 EVCP57679 992 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 PTK7Q13308 1070 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 AP3B2Q13367 1082 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 RAB30Q15771 203 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 UBE2SQ16763 222 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 PFKFB3Q16875 520 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-213ENST00000554508 MCTP2Q6DN12 878 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 RUFY3Q7L099 469 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 DEFB128Q7Z7B8 93 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 CCDC12Q8WUD4 166 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-213ENST00000554508 VWCEQ96DN2 955 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 FAM161BQ96MY7 647 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 GUCD1Q96NT3 240 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 CTAGE1Q96RT6 745 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 GPR20Q99678 358 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 TM6SF1Q9BZW5 370 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 TTYH1Q9H313 450 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-213ENST00000554508 BCAS3Q9H6U6 928 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 JADE2Q9NQC1 790 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 MSRAQ9UJ68 235 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 CYP46A1Q9Y6A2 500 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 SLC4A7Q9Y6M7 1214 aa9.99□□□□□ -0.81
ACTN1-213ENST00000554508 MYH9P35579 1960 aaKnown RBP9.99□□□□□ -0.81
ACTN1-213ENST00000554508 C17orf102A2RUQ5 167 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 EIF5BO60841 1220 aaKnown RBP9.98□□□□□ -0.81
ACTN1-213ENST00000554508 GNAT1P11488 350 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 SCG2P13521 617 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 ITGB5P18084 799 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 DNAJB2P25686 324 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 AKAP17AQ02040 695 aaKnown RBP9.98□□□□□ -0.81
ACTN1-213ENST00000554508 MTMR1Q13613 665 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 TYW1BQ6NUM6 668 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 TIFAQ96CG3 184 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 CDX2Q99626 313 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-213ENST00000554508 MXRA8Q9BRK3 442 aa9.98□□□□□ -0.81
ACTN1-213ENST00000554508 FTOQ9C0B1 505 aaKnown RBP eCLIP9.98□□□□□ -0.81
ACTN1-213ENST00000554508 CXXC1Q9P0U4 656 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-213ENST00000554508 ZNF215Q9UL58 517 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-213ENST00000554508 ESYT2A0FGR8 921 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 ZBBXA8MT70 800 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 GRXCR1A8MXD5 290 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 ATP9AO75110 1047 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 BAIAP3O94812 1187 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 SMIM10L2AP0DMW4 78 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 SMIM10L2BP0DMW5 78 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 CKBP12277 381 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 KCNA2P16389 499 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 IFNAR1P17181 557 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 GNA11P29992 359 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
ACTN1-213ENST00000554508 HOXC8P31273 242 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
ACTN1-213ENST00000554508 NTRK3Q16288 839 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 UTP14CQ5TAP6 766 aaKnown RBP9.97□□□□□ -0.81
ACTN1-213ENST00000554508 LRRC8DQ7L1W4 858 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 SEPT1Q8WYJ6 367 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
ACTN1-213ENST00000554508 ZNF274Q96GC6 653 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-213ENST00000554508 RNF26Q9BY78 433 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-213ENST00000554508 ANO3Q9BYT9 981 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 PBX4Q9BYU1 374 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 ZMYND12Q9H0C1 365 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 C6orf50Q9HD87 102 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 KCNH7Q9NS40 1196 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 NFASCO94856 1347 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
ACTN1-213ENST00000554508 COL6A3P12111 3177 aa9.96□□□□□ -0.81
ACTN1-213ENST00000554508 PTPRSQ13332 1948 aa9.96□□□□□ -0.81
ACTN1-213ENST00000554508 GSTTP1A0A1W2PQM5 241 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 MEIS1O00470 390 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 CAND2O75155 1236 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 CXCL10P02778 98 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 ATP2A2P16615 1042 aaKnown RBP9.96□□□□□ -0.82
ACTN1-213ENST00000554508 TCF7P36402 384 aaPredicted RBP9.96□□□□□ -0.82
ACTN1-213ENST00000554508 ZNF76P36508 570 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 SREBF1P36956 1147 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 PBX2P40425 430 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 ZNF200P98182 395 aaPredicted RBP9.96□□□□□ -0.82
ACTN1-213ENST00000554508 TOB2Q14106 344 aaPredicted RBP9.96□□□□□ -0.82
ACTN1-213ENST00000554508 PKN1Q16512 942 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 TRIM71Q2Q1W2 868 aaKnown RBP9.96□□□□□ -0.82
ACTN1-213ENST00000554508 CEP55Q53EZ4 464 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 NIPA1Q7RTP0 329 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 SERINC5Q86VE9 423 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 SLC17A8Q8NDX2 589 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 CCDC148Q8NFR7 591 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms