RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 KCNA6P17658 529 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 KRT15P19012 456 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 FBLN1P23142 703 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 ZNF460Q14592 562 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 GPR19Q15760 415 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 DALRD3Q5D0E6 543 aaKnown RBP7.33□□□□□ -1.24
SCFD1-211ENST00000554437 TAF7LQ5H9L4 462 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 ABHD17CQ6PCB6 329 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 ETV3LQ6ZN32 361 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 ARHGAP36Q6ZRI8 547 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 EP400NLQ6ZTU2 488 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 DDX53Q86TM3 631 aaKnown RBP7.33□□□□□ -1.24
SCFD1-211ENST00000554437 IGDCC3Q8IVU1 814 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 TRIM48Q8IWZ4 208 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 CISD2Q8N5K1 135 aaKnown RBP7.33□□□□□ -1.24
SCFD1-211ENST00000554437 IGSF22Q8N9C0 903 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 RNF38Q9H0F5 515 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 SLKQ9H2G2 1235 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-211ENST00000554437 ASH2LQ9UBL3 628 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 FAN1Q9Y2M0 1017 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 TCRBV5S4A2TA0A5A2 114 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 FLT3P36888 993 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 MC3RP41968 323 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 GYS2P54840 703 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 TUSC3Q13454 348 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 ZCCHC8Q6NZY4 707 aaKnown RBP7.32□□□□□ -1.24
SCFD1-211ENST00000554437 FAM126BQ8IXS8 530 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 CELF4Q9BZC1 486 aaKnown RBP7.32□□□□□ -1.24
SCFD1-211ENST00000554437 CD244Q9BZW8 370 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 INTS7Q9NVH2 962 aaKnown RBP7.32□□□□□ -1.24
SCFD1-211ENST00000554437 SAMD15Q9P1V8 674 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 IRAK3Q9Y616 596 aa7.32□□□□□ -1.24
SCFD1-211ENST00000554437 NPTXRO95502 500 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 LTFP02788 710 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 KRT1P04264 644 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 JMJD7P0C870 316 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 ATF2P15336 505 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 RAP1GAPP47736 663 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 JAM2P57087 298 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 GRIN1Q05586 938 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 CACNB2Q08289 660 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-211ENST00000554437 ZNF124Q15973 351 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 CNNM4Q6P4Q7 775 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 UBE2R2Q712K3 238 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-211ENST00000554437 PTRH1Q86Y79 214 aaKnown RBP7.31□□□□□ -1.24
SCFD1-211ENST00000554437 MIB1Q86YT6 1006 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 BHLHE22Q8NFJ8 381 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-211ENST00000554437 CLEC4DQ8WXI8 215 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 CPA5Q8WXQ8 436 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 MFSD3Q96ES6 412 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 SIGLEC10Q96LC7 697 aa7.31□□□□□ -1.24
SCFD1-211ENST00000554437 SMG5Q9UPR3 1016 aaKnown RBP7.31□□□□□ -1.24
SCFD1-211ENST00000554437 M0R2C6 588 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 TSPAN15O95858 294 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 AMY2AP04746 511 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 AMY2BP19961 511 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 STAT5AP42229 794 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 LACTBP83111 547 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-211ENST00000554437 CFAP100Q494V2 611 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 TMEM177Q53S58 311 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 PIK3R6Q5UE93 754 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 CD300LDQ6UXZ3 194 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 KCTD1Q719H9 257 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-211ENST00000554437 LRRTM3Q86VH5 581 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 NLGN4XQ8N0W4 816 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 SH3RF2Q8TEC5 729 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 TOE1Q96GM8 510 aaKnown RBP7.3□□□□□ -1.24
SCFD1-211ENST00000554437 DTLQ9NZJ0 730 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 CNOT6Q9ULM6 557 aaKnown RBP7.3□□□□□ -1.24
SCFD1-211ENST00000554437 SRPK3Q9UPE1 567 aa7.3□□□□□ -1.24
SCFD1-211ENST00000554437 ZNF561-AS1K7EIQ3 104 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 KCNK3O14649 394 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 C8AP07357 584 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 IGFBP6P24592 240 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-211ENST00000554437 LIMS1P48059 325 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 NEK4P51957 841 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 FOXO4P98177 505 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 CDCA2Q69YH5 1023 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-211ENST00000554437 OVCH1Q7RTY7 1134 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 B3GNT8Q7Z7M8 397 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 ZC3H18Q86VM9 953 aaKnown RBP7.29□□□□□ -1.24
SCFD1-211ENST00000554437 FAM26EQ8N5C1 309 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 C2orf69Q8N8R5 385 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 WNK4Q96J92 1243 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 SMURF1Q9HCE7 757 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 TELO2Q9Y4R8 837 aa7.29□□□□□ -1.24
SCFD1-211ENST00000554437 MAN2B1O00754 1011 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 GLRX3O76003 335 aaKnown RBP7.28□□□□□ -1.24
SCFD1-211ENST00000554437 NKX3-2P78367 333 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 SSPNQ14714 243 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 TM4SF20Q53R12 229 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 EGFLAMQ63HQ2 1017 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 ANKLE2Q86XL3 938 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 SMARCC2Q8TAQ2 1214 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms