RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TJP3O95049 919 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 SKIV2L2P42285 1042 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 ERVK-9P63128 1117 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 CYP27A1Q02318 531 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 ADCY1Q08828 1119 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 EIF4A2Q14240 407 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 KCNJ12Q14500 433 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 SAFBQ15424 915 aaKnown RBP eCLIP10.43□□□□□ -0.74
SIX4-202ENST00000554079 IMMTQ16891 758 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 P3H1Q32P28 736 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 MCMDC2Q4G0Z9 681 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 DAB2IPQ5VWQ8 1189 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 ZNF554Q86TJ5 538 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 SMYD4Q8IYR2 804 aaPredicted RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 RBBP8NLQ8NC74 664 aaPredicted RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 STKLD1Q8NE28 680 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 GATA6Q92908 595 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 ZNF653Q96CK0 615 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 IQCDQ96DY2 449 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 AIFM3Q96NN9 605 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 TTYH3Q9C0H2 523 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 NACA2Q9H009 215 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 NSRP1Q9H0G5 558 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 PHAXQ9H814 394 aaKnown RBP10.43□□□□□ -0.74
SIX4-202ENST00000554079 RNF14Q9UBS8 474 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 ABCF2Q9UG63 623 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 COMMD3-BMI1R4GMX3 469 aa10.43□□□□□ -0.74
SIX4-202ENST00000554079 PALLDQ8WX93 1383 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 PCDH11XQ9BZA7 1347 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 A0A1W2PQC6 194 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 ASLP04424 464 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 ITGA2BP08514 1039 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 BCRP11274 1271 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 PTPREP23469 700 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 MMP13P45452 471 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 UBXN1Q04323 297 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 MTMR3Q13615 1198 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 INF2Q27J81 1249 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 PARP6Q2NL67 630 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 CFAP221Q4G0U5 840 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 SH3RF1Q7Z6J0 888 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 RNF10Q8N5U6 811 aaKnown RBP10.42□□□□□ -0.74
SIX4-202ENST00000554079 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 SH3TC2Q8TF17 1288 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 PPP2R3CQ969Q6 453 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 RNF25Q96BH1 459 aaPredicted RBP10.42□□□□□ -0.74
SIX4-202ENST00000554079 RAB3IPQ96QF0 476 aaPredicted RBP10.42□□□□□ -0.74
SIX4-202ENST00000554079 KRT12Q99456 494 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 ETNK2Q9NVF9 386 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 NMRK1Q9NWW6 199 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 GGT7Q9UJ14 662 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 FBXL5Q9UKA1 691 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 USP15Q9Y4E8 981 aaPredicted RBP10.42□□□□□ -0.74
SIX4-202ENST00000554079 LMTK3Q96Q04 1460 aa10.42□□□□□ -0.74
SIX4-202ENST00000554079 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.41□□□□□ -0.74
SIX4-202ENST00000554079 MAGEA13PA6NCF6 341 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 NVLO15381 856 aaKnown RBP10.41□□□□□ -0.74
SIX4-202ENST00000554079 COBLO75128 1261 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 SUPT3HO75486 399 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 GJB6O95452 261 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 CD97P48960 835 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 GSTM4Q03013 218 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 RCN2Q14257 317 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 ZC2HC1CQ53FD0 456 aaPredicted RBP10.41□□□□□ -0.74
SIX4-202ENST00000554079 SH2D4BQ5SQS7 431 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 TBC1D9BQ66K14 1250 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 KRT40Q6A162 431 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 SEPT14Q6ZU15 432 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 NME9Q86XW9 330 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 LRRC43Q8N309 656 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 ATP11CQ8NB49 1132 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 SUPT20HQ8NEM7 779 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 WDR66Q8TBY9 1149 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 ZNF507Q8TCN5 953 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 PIGOQ8TEQ8 1089 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 TEKT1Q969V4 418 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 FERMT2Q96AC1 680 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 LENG1Q96BZ8 264 aaPredicted RBP10.41□□□□□ -0.74
SIX4-202ENST00000554079 NEUROG2Q9H2A3 272 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 TBC1D30Q9Y2I9 924 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 ATP8A1Q9Y2Q0 1164 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 hCG_2014768A0A024R1R8 64 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 GRID2IPA4D2P6 1211 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 GOLGA8BA8MQT2 603 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 LGALS16A8MUM7 142 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 CETN3O15182 167 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 FOXO3O43524 673 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 ATP9AO75110 1047 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 HOXD12P35452 270 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 CCNFP41002 786 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 HPCAP84074 193 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 CUL1Q13616 776 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 TSR1Q2NL82 804 aaKnown RBP10.41□□□□□ -0.74
SIX4-202ENST00000554079 MUM1Q2TAK8 710 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 KRT71Q3SY84 523 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 USH1GQ495M9 461 aa10.41□□□□□ -0.74
SIX4-202ENST00000554079 KLHDC7AQ5VTJ3 777 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms