RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TSEN34Q9BSV6 310 aaKnown RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 AGXT2Q9BYV1 514 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 WDR11Q9BZH6 1224 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 PXMP2Q9NR77 195 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 PRKAG2Q9UGJ0 569 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 RBBP6Q7Z6E9 1792 aaKnown RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 hCG_1642624A0A1W2PR95 340 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 STAM2O75886 525 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 CABYRO75952 493 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 TXNP10599 105 aaKnown RBP9.56□□□□□ -0.88
PSEN1-209ENST00000553855 XBP1P17861 261 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 PDIA3P30101 505 aaKnown RBP9.56□□□□□ -0.88
PSEN1-209ENST00000553855 ADD1P35611 737 aaKnown RBP9.56□□□□□ -0.88
PSEN1-209ENST00000553855 CPT1AP50416 773 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 ADCY7P51828 1080 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 CCT2P78371 535 aaKnown RBP9.56□□□□□ -0.88
PSEN1-209ENST00000553855 SSRP1Q08945 709 aaKnown RBP9.56□□□□□ -0.88
PSEN1-209ENST00000553855 STK3Q13188 491 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 DUSP28Q4G0W2 176 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 MCTP2Q6DN12 878 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 SEPT14Q6ZU15 432 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 TLK2Q86UE8 772 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 CCDC148Q8NFR7 591 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 GLT1D1Q96MS3 346 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 SLC26A6Q9BXS9 759 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 C6orf50Q9HD87 102 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 Q9Y3F1 56 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 MRVI1Q9Y6F6 885 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 CNTNAP5Q8WYK1 1306 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 SYNRGQ9UMZ2 1314 aa9.56□□□□□ -0.88
PSEN1-209ENST00000553855 KIAA0100Q14667 2235 aaKnown RBP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 PIK3CDO00329 1044 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 PRPF3O43395 683 aaKnown RBP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 ACTN4O43707 911 aaKnown RBP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 FOSP01100 380 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 SCG2P13521 617 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 EDNRBP24530 442 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 GNA11P29992 359 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 CDC27P30260 824 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 NEK4P51957 841 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 GJA9P57773 515 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 GHRHRQ02643 423 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 COL9A3Q14050 684 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 SLC35G1Q2M3R5 365 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 XRRA1Q6P2D8 792 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 NLRX1Q86UT6 975 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 OR6J1Q8NGC5 347 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 BICD2Q8TD16 824 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 FERMT2Q96AC1 680 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 LRCH3Q96II8 777 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 UCN2Q96RP3 112 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 PDCD2LQ9BRP1 358 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 RNF26Q9BY78 433 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 C22orf23Q9BZE7 217 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 ALDH8A1Q9H2A2 487 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-209ENST00000553855 STARD7Q9NQZ5 370 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 PDGFCQ9NRA1 345 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 BARHL2Q9NY43 387 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 SLC27A5Q9Y2P5 690 aa9.55□□□□□ -0.88
PSEN1-209ENST00000553855 PLXNA1Q9UIW2 1896 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 SMCO2A6NFE2 343 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 KPNA6O60684 536 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 ADAMTS4O75173 837 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 DEXIO95424 95 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 GH1P01241 217 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 ASGR1P07306 291 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 IFNAR1P17181 557 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 SMPD1P17405 629 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 CST5P28325 142 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 ACLYP53396 1101 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 EVCP57679 992 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 TOB2Q14106 344 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 PGM5Q15124 567 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 KCNA10Q16322 511 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 FSCN1Q16658 493 aaKnown RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 PFKFB3Q16875 520 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 PUS10Q3MIT2 529 aaKnown RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 WWC2Q6AWC2 1192 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 USP17L6PQ6QN14 398 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 C7orf61Q8IZ16 206 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 WASF1Q92558 559 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 KATNBL1Q9H079 304 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 UPF3AQ9H1J1 476 aaKnown RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 COL20A1Q9P218 1284 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 ATP11BQ9Y2G3 1177 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 ZNFX1Q9P2E3 1918 aaKnown RBP9.54□□□□□ -0.88
PSEN1-209ENST00000553855 ASTN1O14525 1302 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 MROH7Q68CQ1 1323 aa9.54□□□□□ -0.88
PSEN1-209ENST00000553855 NID2Q14112 1375 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms