RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 CALCRLQ16602 461 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 GJC2Q5T442 439 aaPredicted RBP20.41■□□□□ 0.86
PSEN1-208ENST00000553719 LENG1Q96BZ8 264 aaPredicted RBP20.41■□□□□ 0.86
PSEN1-208ENST00000553719 HMX1Q9NP08 348 aaPredicted RBP20.41■□□□□ 0.86
PSEN1-208ENST00000553719 VAV3Q9UKW4 847 aa20.41■□□□□ 0.86
PSEN1-208ENST00000553719 GGPS1O95749 300 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 PRPHP41219 470 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 NEDD9Q14511 834 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 SLC39A14Q15043 492 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 MTFR1Q15390 333 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 FOXD4L6Q3SYB3 417 aaPredicted RBP20.4■□□□□ 0.86
PSEN1-208ENST00000553719 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
PSEN1-208ENST00000553719 LHX8Q68G74 356 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 METTL7BQ6UX53 244 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 FOXD4L3Q6VB84 417 aaPredicted RBP20.4■□□□□ 0.86
PSEN1-208ENST00000553719 SLFN12Q8IYM2 578 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 LINC00301Q8NCQ3 95 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 GIMAP8Q8ND71 665 aaPredicted RBP20.4■□□□□ 0.86
PSEN1-208ENST00000553719 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.4■□□□□ 0.861e-9■■■■■ 54.1
PSEN1-208ENST00000553719 UNC93B1Q9H1C4 597 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 TBC1D22BQ9NU19 505 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 PKD2L1Q9P0L9 805 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 Q9Y3F1 56 aa20.4■□□□□ 0.86
PSEN1-208ENST00000553719 CTAGE5O15320 804 aa20.39■□□□□ 0.85
PSEN1-208ENST00000553719 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
PSEN1-208ENST00000553719 YEATS4O95619 227 aa20.39■□□□□ 0.85
PSEN1-208ENST00000553719 IL17AQ16552 155 aa20.39■□□□□ 0.85
PSEN1-208ENST00000553719 ARL6IP4Q66PJ3 421 aaKnown RBP20.39■□□□□ 0.85
PSEN1-208ENST00000553719 TNPO1Q92973 898 aaKnown RBP20.39■□□□□ 0.85
PSEN1-208ENST00000553719 UIMC1Q96RL1 719 aa20.39■□□□□ 0.85
PSEN1-208ENST00000553719 UPF3AQ9H1J1 476 aaKnown RBP20.39■□□□□ 0.85
PSEN1-208ENST00000553719 TFIP11Q9UBB9 837 aaKnown RBP20.39■□□□□ 0.85
PSEN1-208ENST00000553719 DDX20Q9UHI6 824 aaKnown RBP20.39■□□□□ 0.85
PSEN1-208ENST00000553719 CEP131Q9UPN4 1083 aa20.39■□□□□ 0.85
PSEN1-208ENST00000553719 TELO2Q9Y4R8 837 aa20.39■□□□□ 0.85
PSEN1-208ENST00000553719 ADAMTS4O75173 837 aa20.38■□□□□ 0.85
PSEN1-208ENST00000553719 CCNE2O96020 404 aa20.38■□□□□ 0.85
PSEN1-208ENST00000553719 GH1P01241 217 aa20.38■□□□□ 0.85
PSEN1-208ENST00000553719 HOXD8P13378 290 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-208ENST00000553719 CCL5P13501 91 aa20.38■□□□□ 0.85
PSEN1-208ENST00000553719 LRCH2Q5VUJ6 765 aa20.38■□□□□ 0.85
PSEN1-208ENST00000553719 CYFIP1Q7L576 1253 aa20.38■□□□□ 0.85
PSEN1-208ENST00000553719 JPH1Q9HDC5 661 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-208ENST00000553719 SYNRGQ9UMZ2 1314 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 MSCO60682 206 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 GAS7O60861 476 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 CNGA1P29973 690 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 FXR2P51116 673 aaKnown RBP eCLIP20.37■□□□□ 0.85
PSEN1-208ENST00000553719 GJA9P57773 515 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 KRT85P78386 507 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 CEBPZQ03701 1054 aaKnown RBP20.37■□□□□ 0.85
PSEN1-208ENST00000553719 PPP2R5CQ13362 524 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 CLEC17AQ6ZS10 378 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 TLK2Q86UE8 772 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 SDF4Q9BRK5 362 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 TEKT3Q9BXF9 490 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 FBXO2Q9UK22 296 aaPredicted RBP20.37■□□□□ 0.85
PSEN1-208ENST00000553719 RCOR1Q9UKL0 485 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 CFAP45Q9UL16 551 aa20.37■□□□□ 0.85
PSEN1-208ENST00000553719 RARBP10826 455 aa20.36■□□□□ 0.85
PSEN1-208ENST00000553719 LAMC2Q13753 1193 aa20.36■□□□□ 0.85
PSEN1-208ENST00000553719 HSDL1Q3SXM5 330 aa20.36■□□□□ 0.85
PSEN1-208ENST00000553719 ZNF746Q6NUN9 644 aaPredicted RBP20.36■□□□□ 0.85
PSEN1-208ENST00000553719 IGSF22Q8N9C0 903 aa20.36■□□□□ 0.85
PSEN1-208ENST00000553719 UNC45AQ9H3U1 944 aa20.36■□□□□ 0.85
PSEN1-208ENST00000553719 TTC12Q9H892 705 aaPredicted RBP20.36■□□□□ 0.85
PSEN1-208ENST00000553719 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
PSEN1-208ENST00000553719 A6NJR5 290 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 PPP6R2O75170 966 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 ATG7O95352 703 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 BAG4O95429 457 aaKnown RBP20.35■□□□□ 0.85
PSEN1-208ENST00000553719 TXKP42681 527 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 KRT76Q01546 638 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
PSEN1-208ENST00000553719 OR6J1Q8NGC5 347 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 PPTC7Q8NI37 304 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 LEO1Q8WVC0 666 aaPredicted RBP20.35■□□□□ 0.85
PSEN1-208ENST00000553719 GPR20Q99678 358 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 PCDHA12Q9UN75 941 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 WDR81Q562E7 1941 aa20.35■□□□□ 0.85
PSEN1-208ENST00000553719 ELP1O95163 1332 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 GSTTP1A0A1W2PQM5 241 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 MYADML2A6NDP7 307 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 DDX39AO00148 427 aaKnown RBP20.34■□□□□ 0.85
PSEN1-208ENST00000553719 EML1O00423 815 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 SPTLC2O15270 562 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 DYNC1LI2O43237 492 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-208ENST00000553719 SORBS3O60504 671 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 CST5P28325 142 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-208ENST00000553719 IRX5P78411 483 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-208ENST00000553719 GRIN1Q05586 938 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 STK38Q15208 465 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 CCSAPQ6IQ19 270 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-208ENST00000553719 SMAP1Q8IYB5 467 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-208ENST00000553719 KLHDC9Q8NEP7 349 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 AFG1LQ8WV93 481 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 FERMT2Q96AC1 680 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 SPATA33Q96N06 139 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 MLXIPQ9HAP2 919 aa20.34■□□□□ 0.85
PSEN1-208ENST00000553719 XPNPEP3Q9NQH7 507 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms