RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ANGEL2Q5VTE6 544 aaKnown RBP5.08□□□□□ -1.6
TDP1-207ENST00000553617 ARHGAP27Q6ZUM4 889 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 OTOP3Q7RTS5 596 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 WAPLQ7Z5K2 1190 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 RASSF3Q86WH2 238 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 DGKHQ86XP1 1220 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 CREG2Q8IUH2 290 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 TPH2Q8IWU9 490 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 PLD6Q8N2A8 252 aaKnown RBP5.08□□□□□ -1.6
TDP1-207ENST00000553617 ZNF610Q8N9Z0 462 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 TP53INP1Q96A56 240 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 TMEM169Q96HH4 297 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 RPS6KC1Q96S38 1066 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 ELF4Q99607 663 aaPredicted RBP5.08□□□□□ -1.6
TDP1-207ENST00000553617 G6PC3Q9BUM1 346 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 KRTAP9-2Q9BYQ4 174 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 ZNF700Q9H0M5 742 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 CHST12Q9NRB3 414 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 PCDHGA9Q9Y5G4 932 aaKnown RBP5.08□□□□□ -1.6
TDP1-207ENST00000553617 PCDHGA8Q9Y5G5 932 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 PCDHGA7Q9Y5G6 932 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 PCDHGA6Q9Y5G7 932 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 PCDHGA3Q9Y5H0 932 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 PCDHGA2Q9Y5H1 932 aa5.08□□□□□ -1.6
TDP1-207ENST00000553617 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
TDP1-207ENST00000553617 MAN2B1O00754 1011 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 NKRFO15226 690 aaKnown RBP eCLIP5.07□□□□□ -1.6
TDP1-207ENST00000553617 SNUPNO95149 360 aaKnown RBP5.07□□□□□ -1.6
TDP1-207ENST00000553617 CFBP00751 764 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 U2AF1L5P0DN76 240 aaPredicted RBP5.07□□□□□ -1.6
TDP1-207ENST00000553617 SLC9A1P19634 815 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 FPR2P25090 351 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 RBM10P98175 930 aaKnown RBP5.07□□□□□ -1.6
TDP1-207ENST00000553617 U2AF1Q01081 240 aaKnown RBP eCLIP5.07□□□□□ -1.6
TDP1-207ENST00000553617 TCIRG1Q13488 830 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 ODF1Q14990 250 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 HLA-DQA1Q5Y7H0 255 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 ARHGAP36Q6ZRI8 547 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 CEP68Q76N32 757 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 SMC5Q8IY18 1101 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 CMIPQ8IY22 773 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 CMTR2Q8IYT2 770 aaKnown RBP5.07□□□□□ -1.6
TDP1-207ENST00000553617 KIAA1958Q8N8K9 716 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 NLGN2Q8NFZ4 835 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 SHKBP1Q8TBC3 707 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 PLEKHO2Q8TD55 490 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 NETO1Q8TDF5 533 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 LMBR1Q8WVP7 490 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 DLG3Q92796 817 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 MTA3Q9BTC8 594 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 SEMA6BQ9H3T3 888 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 EPB41L1Q9H4G0 881 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 ZMAT4Q9H898 229 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 ATP13A1Q9HD20 1204 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 TPSG1Q9NRR2 321 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 TOPORSQ9NS56 1045 aaPredicted RBP5.07□□□□□ -1.6
TDP1-207ENST00000553617 OBP2AQ9NY56 170 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 ANKRD6Q9Y2G4 727 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 GIT1Q9Y2X7 761 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 B3GALT1Q9Y5Z6 326 aa5.07□□□□□ -1.6
TDP1-207ENST00000553617 TMEM265A0A087WTH1 108 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 FADS2P1A8MWK0 482 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 PLIN1O60240 522 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 EIF3JO75822 258 aaKnown RBP5.06□□□□□ -1.6
TDP1-207ENST00000553617 KRT37O76014 449 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 PF4V1P10720 104 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 GNAT1P11488 350 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 RPL10P27635 214 aaKnown RBP5.06□□□□□ -1.6
TDP1-207ENST00000553617 LSP1P33241 339 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 GPR3P46089 330 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 SPIRE1Q08AE8 756 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 BIRC2Q13490 618 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 DOC2BQ14184 412 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 ZNF174Q15697 407 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 FIGNQ5HY92 759 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 EPM2AIP1Q7L775 607 aaPredicted RBP5.06□□□□□ -1.6
TDP1-207ENST00000553617 SLCO6A1Q86UG4 719 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 PTRH1Q86Y79 214 aaKnown RBP5.06□□□□□ -1.6
TDP1-207ENST00000553617 RIOX2Q8IUF8 465 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 TEX2Q8IWB9 1127 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 UHMK1Q8TAS1 419 aaKnown RBP5.06□□□□□ -1.6
TDP1-207ENST00000553617 TRMT2BQ96GJ1 504 aaKnown RBP5.06□□□□□ -1.6
TDP1-207ENST00000553617 MAP6Q96JE9 813 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 ORAI2Q96SN7 254 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 NUP88Q99567 741 aaPredicted RBP5.06□□□□□ -1.6
TDP1-207ENST00000553617 OSBPL1AQ9BXW6 950 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 ZDHHC5Q9C0B5 715 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 MS4A5Q9H3V2 200 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.06□□□□□ -1.6
TDP1-207ENST00000553617 TNFRSF10DQ9UBN6 386 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 GULP1Q9UBP9 304 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 SRPK3Q9UPE1 567 aa5.06□□□□□ -1.6
TDP1-207ENST00000553617 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
TDP1-207ENST00000553617 VSTM5A8MXK1 200 aa5.05□□□□□ -1.6
TDP1-207ENST00000553617 C22orf46C9J442 243 aa5.05□□□□□ -1.6
TDP1-207ENST00000553617 KCNK3O14649 394 aa5.05□□□□□ -1.6
TDP1-207ENST00000553617 CLASP2O75122 1294 aaKnown RBP5.05□□□□□ -1.6
TDP1-207ENST00000553617 H2AFYO75367 372 aaKnown RBP5.05□□□□□ -1.6
TDP1-207ENST00000553617 ZRANB2O95218 330 aaKnown RBP eCLIP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms