RNA–Protein interactions for RNA: ENST00000553548.5

SRSF5-204, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-204ENST00000553548 USP28Q96RU2 1077 aa11.2□□□□□ -0.62
SRSF5-204ENST00000553548 NAP1L4Q99733 375 aaKnown RBP11.2□□□□□ -0.62
SRSF5-204ENST00000553548 TFIP11Q9UBB9 837 aaKnown RBP11.2□□□□□ -0.62
SRSF5-204ENST00000553548 Q9Y3F1 56 aa11.2□□□□□ -0.62
SRSF5-204ENST00000553548 NFASCO94856 1347 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 SYNRGQ9UMZ2 1314 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 DDX39AO00148 427 aaKnown RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 TBX3O15119 743 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 NEMFO60524 1076 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 ADAMTS4O75173 837 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 CCNE2O96020 404 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 GH1P01241 217 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 RARBP10826 455 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 GJA9P57773 515 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 NKX3-2P78367 333 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 BEX3Q00994 111 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 CEBPZQ03701 1054 aaKnown RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 DNM1Q05193 864 aaKnown RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 ORC2Q13416 577 aaPredicted RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 NEDD9Q14511 834 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 PTPAQ15257 358 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 CALCRLQ16602 461 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 HSDL1Q3SXM5 330 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 B3GNT9Q6UX72 402 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 TLK2Q86UE8 772 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 DHX37Q8IY37 1157 aaKnown RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 AFG1LQ8WV93 481 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 FAM20AQ96MK3 541 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 RIT2Q99578 217 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 CRISPLD2Q9H0B8 497 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 UPF3AQ9H1J1 476 aaKnown RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 MLXIPQ9HAP2 919 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
SRSF5-204ENST00000553548 MYH15Q9Y2K3 1946 aa11.19□□□□□ -0.62
SRSF5-204ENST00000553548 GSTTP1A0A1W2PQM5 241 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 A6NJR5 290 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 MSCO60682 206 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 SGPL1O95470 568 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 GJB1P08034 283 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 TXKP42681 527 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
SRSF5-204ENST00000553548 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
SRSF5-204ENST00000553548 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 LAMC2Q13753 1193 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 LRCH2Q5VUJ6 765 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 METTL7BQ6UX53 244 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 GIMAP8Q8ND71 665 aaPredicted RBP11.18□□□□□ -0.62
SRSF5-204ENST00000553548 KLHDC9Q8NEP7 349 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 OR6J1Q8NGC5 347 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
SRSF5-204ENST00000553548 SPATA33Q96N06 139 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 GPR20Q99678 358 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 JPH1Q9HDC5 661 aaPredicted RBP11.18□□□□□ -0.62
SRSF5-204ENST00000553548 XPNPEP3Q9NQH7 507 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 TBC1D22BQ9NU19 505 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 CHMP5Q9NZZ3 219 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 SLC9A2Q9UBY0 812 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 VAV3Q9UKW4 847 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 OGDHLQ9ULD0 1010 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 FRMPD3Q5JV73 1810 aa11.18□□□□□ -0.62
SRSF5-204ENST00000553548 EML1O00423 815 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 GAS7O60861 476 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 ATG7O95352 703 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 OR52Z1P0C646 297 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 C6orf222P0C671 652 aaPredicted RBP11.17□□□□□ -0.62
SRSF5-204ENST00000553548 GJA8P48165 433 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 NASPP49321 788 aaPredicted RBP11.17□□□□□ -0.62
SRSF5-204ENST00000553548 ACTR2P61160 394 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 SP4Q02446 784 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 GRIN1Q05586 938 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 SLC39A14Q15043 492 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 LRRC41Q15345 812 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 FSCN1Q16658 493 aaKnown RBP11.17□□□□□ -0.62
SRSF5-204ENST00000553548 SLFN12Q8IYM2 578 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 PPTC7Q8NI37 304 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 ABHD8Q96I13 439 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 ZNF396Q96N95 335 aaPredicted RBP11.17□□□□□ -0.62
SRSF5-204ENST00000553548 PCYT2Q99447 389 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 SDF4Q9BRK5 362 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 AP5M1Q9H0R1 490 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 UNC45AQ9H3U1 944 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 TTC12Q9H892 705 aaPredicted RBP11.17□□□□□ -0.62
SRSF5-204ENST00000553548 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 PCDHA12Q9UN75 941 aa11.17□□□□□ -0.62
SRSF5-204ENST00000553548 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
SRSF5-204ENST00000553548 TCHHQ07283 1943 aa11.16□□□□□ -0.62
SRSF5-204ENST00000553548 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
SRSF5-204ENST00000553548 BAG4O95429 457 aaKnown RBP11.16□□□□□ -0.62
SRSF5-204ENST00000553548 MMP3P08254 477 aa11.16□□□□□ -0.62
SRSF5-204ENST00000553548 HOXD8P13378 290 aaPredicted RBP11.16□□□□□ -0.62
SRSF5-204ENST00000553548 CST5P28325 142 aaPredicted RBP11.16□□□□□ -0.62
SRSF5-204ENST00000553548 MARCKSP29966 332 aaPredicted RBP11.16□□□□□ -0.62
SRSF5-204ENST00000553548 TECP42680 631 aa11.16□□□□□ -0.62
SRSF5-204ENST00000553548 PPP2R5CQ13362 524 aa11.16□□□□□ -0.62
SRSF5-204ENST00000553548 KCNA10Q16322 511 aa11.16□□□□□ -0.62
SRSF5-204ENST00000553548 GNASQ5JWF2 1037 aa11.16□□□□□ -0.62
SRSF5-204ENST00000553548 ZNF746Q6NUN9 644 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms