RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TUSC3Q13454 348 aa9.88□□□□□ -0.83
PCNX1-205ENST00000553508 SYT8Q8NBV8 401 aa9.88□□□□□ -0.83
PCNX1-205ENST00000553508 PCDH19Q8TAB3 1148 aa9.88□□□□□ -0.83
PCNX1-205ENST00000553508 C11orf84Q9BUA3 381 aaPredicted RBP9.88□□□□□ -0.83
PCNX1-205ENST00000553508 PIF1Q9H611 641 aa9.88□□□□□ -0.83
PCNX1-205ENST00000553508 CATSPERZQ9NTU4 200 aa9.88□□□□□ -0.83
PCNX1-205ENST00000553508 SMARCA5O60264 1052 aaPredicted RBP9.87□□□□□ -0.83
PCNX1-205ENST00000553508 TEPPQ6URK8 271 aa9.87□□□□□ -0.83
PCNX1-205ENST00000553508 ZC3H7AQ8IWR0 971 aaKnown RBP9.87□□□□□ -0.83
PCNX1-205ENST00000553508 TRIM48Q8IWZ4 208 aa9.87□□□□□ -0.83
PCNX1-205ENST00000553508 SLC7A14Q8TBB6 771 aa9.87□□□□□ -0.83
PCNX1-205ENST00000553508 CD244Q9BZW8 370 aa9.87□□□□□ -0.83
PCNX1-205ENST00000553508 KANSL2Q9H9L4 492 aa9.87□□□□□ -0.83
PCNX1-205ENST00000553508 NGRNQ9NPE2 291 aaKnown RBP9.87□□□□□ -0.83
PCNX1-205ENST00000553508 SPATA6Q9NWH7 488 aaPredicted RBP9.87□□□□□ -0.83
PCNX1-205ENST00000553508 LRG1P02750 347 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 ITGA1P56199 1179 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 CYP4F22Q6NT55 531 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 ZDHHC14Q8IZN3 488 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 UHMK1Q8TAS1 419 aaKnown RBP9.86□□□□□ -0.83
PCNX1-205ENST00000553508 FEZF2Q8TBJ5 459 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 FBXW5Q969U6 566 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 ZSWIM3Q96MP5 696 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 SPATA25Q9BR10 227 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 PARD6AQ9NPB6 346 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 RBPJLQ9UBG7 517 aa9.86□□□□□ -0.83
PCNX1-205ENST00000553508 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.85□□□□□ -0.83
PCNX1-205ENST00000553508 SASH1O94885 1247 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 RASGRP1O95267 797 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 KRT15P19012 456 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 DNM2P50570 870 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 SLURP1P55000 103 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 ST5P78524 1137 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 CAP1Q01518 475 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 DLX2Q07687 328 aaPredicted RBP9.85□□□□□ -0.83
PCNX1-205ENST00000553508 TMC5Q6UXY8 1006 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 LIPIQ6XZB0 460 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 TTLL7Q6ZT98 887 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 LINC00482Q8N8I6 264 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 KYQ8NBH2 561 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 KCNC2Q96PR1 638 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 SFMBT1Q9UHJ3 866 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 TELO2Q9Y4R8 837 aa9.85□□□□□ -0.83
PCNX1-205ENST00000553508 TCRBV5S4A2TA0A5A2 114 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 ARVCFO00192 962 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 NAT1P18440 290 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 SQSTM1Q13501 440 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 HABP4Q5JVS0 413 aaKnown RBP9.84□□□□□ -0.83
PCNX1-205ENST00000553508 OSTM1Q86WC4 334 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 MAGEB10Q96LZ2 347 aaPredicted RBP9.84□□□□□ -0.83
PCNX1-205ENST00000553508 PCDH18Q9HCL0 1135 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 CBLCQ9ULV8 474 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
PCNX1-205ENST00000553508 CCDC163A0A0D9SF12 145 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 EFCAB14O75071 495 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 APPP05067 770 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 KCNC1P48547 511 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 ARHGAP36Q6ZRI8 547 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 BRAPQ7Z569 592 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.83□□□□□ -0.84
PCNX1-205ENST00000553508 SH3RF2Q8TEC5 729 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 NTMQ9P121 344 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 USP35Q9P2H5 1018 aa9.83□□□□□ -0.84
PCNX1-205ENST00000553508 CCDC66A2RUB6 948 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 SH3D21A4FU49 640 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 KCNK3O14649 394 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 RAPGEF3O95398 923 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 PDE6AP16499 860 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 SARSP49591 514 aaKnown RBP9.82□□□□□ -0.84
PCNX1-205ENST00000553508 ADAM9Q13443 819 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 PAN2Q504Q3 1202 aaKnown RBP9.82□□□□□ -0.84
PCNX1-205ENST00000553508 EP400NLQ6ZTU2 488 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 KCTD1Q719H9 257 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 C16orf59Q7L2K0 433 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 CARFQ8N187 725 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 GSTCDQ8NEC7 633 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 SCLYQ96I15 445 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 NCOA5Q9HCD5 579 aaKnown RBP9.82□□□□□ -0.84
PCNX1-205ENST00000553508 CROTQ9UKG9 612 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 WASF3Q9UPY6 502 aa9.82□□□□□ -0.84
PCNX1-205ENST00000553508 OTOL1A6NHN0 477 aaPredicted RBP9.81□□□□□ -0.84
PCNX1-205ENST00000553508 THBS2P35442 1172 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 JAM2P57087 298 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 GPR19Q15760 415 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 CRY1Q16526 586 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 FAM47CQ5HY64 1035 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 PHF19Q5T6S3 580 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 FGD2Q7Z6J4 655 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 PTRH1Q86Y79 214 aaKnown RBP9.81□□□□□ -0.84
PCNX1-205ENST00000553508 CISD2Q8N5K1 135 aaKnown RBP9.81□□□□□ -0.84
PCNX1-205ENST00000553508 TTLL6Q8N841 843 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 MRPL4Q9BYD3 311 aaKnown RBP9.81□□□□□ -0.84
PCNX1-205ENST00000553508 COQ6Q9Y2Z9 468 aa9.81□□□□□ -0.84
PCNX1-205ENST00000553508 HOXA5P20719 270 aa9.8□□□□□ -0.84
PCNX1-205ENST00000553508 TRIM61Q5EBN2 209 aa9.8□□□□□ -0.84
PCNX1-205ENST00000553508 TTLL10Q6ZVT0 673 aa9.8□□□□□ -0.84
PCNX1-205ENST00000553508 TTLL11Q8NHH1 800 aa9.8□□□□□ -0.84
PCNX1-205ENST00000553508 LUC7LQ9NQ29 371 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms