RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GTF2IRD1Q9UHL9 959 aa11.49□□□□□ -0.57
ACTN1-208ENST00000553370 GCOM1H8Y6P7 765 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-208ENST00000553370 IFIT3O14879 490 aaKnown RBP11.48□□□□□ -0.57
ACTN1-208ENST00000553370 EFCAB14O75071 495 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 GGPS1O95749 300 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 POLR2MP0CAP2 368 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 CKBP12277 381 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 COL9A1P20849 921 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 TFF2Q03403 129 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 TAP1Q03518 808 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 IKBKEQ14164 716 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 HIC1Q14526 733 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 WTAPQ15007 396 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 GNPTABQ3T906 1256 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 SESTD1Q86VW0 696 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 STAG2Q8N3U4 1231 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 GDPD5Q8WTR4 605 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 PIBF1Q8WXW3 757 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
ACTN1-208ENST00000553370 MTCH2Q9Y6C9 303 aa11.48□□□□□ -0.57
ACTN1-208ENST00000553370 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 THPOP40225 353 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 HSD17B4P51659 736 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 KCNQ1P51787 676 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 PTK7Q13308 1070 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 AMHR2Q16671 573 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 EXOC6Q8TAG9 804 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 KAT2BQ92831 832 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 CUL5Q93034 780 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 HLA-CQ95604 372 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 EMID1Q96A84 441 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-208ENST00000553370 NECAB3Q96P71 396 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-208ENST00000553370 PDCD2LQ9BRP1 358 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 COG5Q9UP83 839 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 XIRP2A4UGR9 3374 aa11.47□□□□□ -0.57
ACTN1-208ENST00000553370 MYH9P35579 1960 aaKnown RBP11.47□□□□□ -0.57
ACTN1-208ENST00000553370 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 C17orf102A2RUQ5 167 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 EPOPA6NHQ4 379 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 F2P00734 622 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 IGHDP01880 384 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 AMHP03971 560 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 DEFB103AP81534 67 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 GRB10Q13322 594 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 PGM5Q15124 567 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 CELF3Q5SZQ8 465 aaKnown RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 KRT40Q6A162 431 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 TMCO2Q7Z6W1 182 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 MYOCDQ8IZQ8 938 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 DHX38Q92620 1227 aaKnown RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 ATP6V0A1Q93050 837 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 VWCEQ96DN2 955 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 TGS1Q96RS0 853 aaKnown RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 PIGSQ96S52 555 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 MAP3K20Q9NYL2 800 aaKnown RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 SEC63Q9UGP8 760 aaKnown RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 MAD2L2Q9UI95 211 aa11.46□□□□□ -0.57
ACTN1-208ENST00000553370 ZNF215Q9UL58 517 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-208ENST00000553370 LCHNA4D1U4 455 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 LGR5O75473 907 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 SP4Q02446 784 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 GRM4Q14833 912 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 ZNF618Q5T7W0 954 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 SAMD3Q8N6K7 520 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 CTCFLQ8NI51 663 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-208ENST00000553370 SMARCC2Q8TAQ2 1214 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 DDX12PQ92771 950 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 RAD9AQ99638 391 aa11.45□□□□□ -0.58
ACTN1-208ENST00000553370 EVPLQ92817 2033 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 PNMA6FA0A0J9YX94 578 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 RSPH10B2B2RC85 870 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 NBNO60934 754 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 GJB5O95377 273 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 CXCL10P02778 98 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 CTSHP09668 335 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 RSPH10BP0C881 870 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 GNAT1P11488 350 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 KIF5BP33176 963 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 ZNF200P98182 395 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-208ENST00000553370 RBL2Q08999 1139 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 SEC23AQ15436 765 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 HSDL1Q3SXM5 330 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 CASC1Q6TDU7 716 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 NFXL1Q6ZNB6 911 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 STOX1Q6ZVD7 989 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 PARP9Q8IXQ6 854 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 IL31RAQ8NI17 732 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 SEPT8Q92599 483 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 RRP36Q96EU6 259 aaKnown RBP11.44□□□□□ -0.58
ACTN1-208ENST00000553370 C1QTNF1Q9BXJ1 281 aa11.44□□□□□ -0.58
ACTN1-208ENST00000553370 ATG2AQ2TAZ0 1938 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms