RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 GJB5O95377 273 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 PLEKHA8P1O95397 391 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 CTSHP09668 335 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 RSPH10BP0C881 870 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 BMP1P13497 986 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 POU3F3P20264 500 aaPredicted RBP13.24□□□□□ -0.29
NEK3-204ENST00000552973 NEDD9Q14511 834 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 SERINC5Q86VE9 423 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 TRIM50Q86XT4 487 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
NEK3-204ENST00000552973 GDPD5Q8WTR4 605 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 CUL5Q93034 780 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
NEK3-204ENST00000552973 GPR20Q99678 358 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 LRRC2Q9BYS8 371 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 OSBPL7Q9BZF2 842 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 SETD4Q9NVD3 440 aa13.24□□□□□ -0.29
NEK3-204ENST00000552973 VCANP13611 3396 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 MEIS2O14770 477 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 FIBPO43427 364 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 DDAH1O94760 285 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 ICAM3P32942 547 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 METTL7BQ6UX53 244 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 MYOCDQ8IZQ8 938 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
NEK3-204ENST00000552973 RAD9AQ99638 391 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 SUGCTQ9HAC7 445 aa13.23□□□□□ -0.29
NEK3-204ENST00000552973 SEC63Q9UGP8 760 aaKnown RBP13.23□□□□□ -0.29
NEK3-204ENST00000552973 PRUNE2Q8WUY3 3088 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 LINC01553A4QN01 128 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 SH2B2O14492 632 aaPredicted RBP13.22□□□□□ -0.29
NEK3-204ENST00000552973 SLC27A2O14975 620 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 KIF5BP33176 963 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 MCM5P33992 734 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 USP26Q9BXU7 913 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 LSG1Q9H089 658 aaKnown RBP13.22□□□□□ -0.29
NEK3-204ENST00000552973 PKD2L1Q9P0L9 805 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 GBF1Q92538 1859 aa13.22□□□□□ -0.29
NEK3-204ENST00000552973 FRMPD4Q14CM0 1322 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 EFCAB14O75071 495 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 ATP9AO75110 1047 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 STAM2O75886 525 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 UPP2O95045 317 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 AMHP03971 560 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 ARHGAP4P98171 946 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 UBE2SQ16763 222 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 AAK1Q2M2I8 961 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 NLRX1Q86UT6 975 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 SKAP1Q86WV1 359 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 HLA-CQ95604 372 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 TGS1Q96RS0 853 aaKnown RBP13.21□□□□□ -0.29
NEK3-204ENST00000552973 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 C17orf80Q9BSJ5 609 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 PSTPIP2Q9H939 334 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 RAPGEFL1Q9UHV5 662 aa13.21□□□□□ -0.29
NEK3-204ENST00000552973 EMSYQ7Z589 1322 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 PIK3CDO00329 1044 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 COL9A1P20849 921 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 SMARCA1P28370 1054 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 HOXC8P31273 242 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 GNAQP50148 359 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 ERVK-21P61565 698 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 PLEKHG4Q58EX7 1191 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 TMTC2Q8N394 836 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 SEPT8Q92599 483 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 ESYT1Q9BSJ8 1104 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 ANO2Q9NQ90 1003 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
NEK3-204ENST00000552973 COG5Q9UP83 839 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
NEK3-204ENST00000552973 CUL9Q8IWT3 2517 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 GNAT1P11488 350 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 ITGB5P18084 799 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 MARK3P27448 753 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
NEK3-204ENST00000552973 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
NEK3-204ENST00000552973 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 LMBR1Q8WVP7 490 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 SENP7Q9BQF6 1050 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 MTA3Q9BTC8 594 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 INSL6Q9Y581 213 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
NEK3-204ENST00000552973 SPTBN5Q9NRC6 3674 aaKnown RBP13.18□□□□□ -0.3
NEK3-204ENST00000552973 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.18□□□□□ -0.3
NEK3-204ENST00000552973 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
NEK3-204ENST00000552973 CALM1P0DP23 149 aa13.18□□□□□ -0.3
NEK3-204ENST00000552973 CALM2P0DP24 149 aa13.18□□□□□ -0.3
NEK3-204ENST00000552973 CALM3P0DP25 149 aa13.18□□□□□ -0.3
NEK3-204ENST00000552973 KCNA2P16389 499 aa13.18□□□□□ -0.3
NEK3-204ENST00000552973 LIFRP42702 1097 aa13.18□□□□□ -0.3
NEK3-204ENST00000552973 XRRA1Q6P2D8 792 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms