RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ZP2Q05996 745 aa19.65■□□□□ 0.74
CACNB3-222ENST00000552465 EP400NLQ6ZTU2 488 aa19.65■□□□□ 0.74
CACNB3-222ENST00000552465 STAG2Q8N3U4 1231 aa19.65■□□□□ 0.74
CACNB3-222ENST00000552465 SAMD3Q8N6K7 520 aa19.65■□□□□ 0.74
CACNB3-222ENST00000552465 IL31RAQ8NI17 732 aa19.65■□□□□ 0.74
CACNB3-222ENST00000552465 GPKOWQ92917 476 aaPredicted RBP eCLIP19.65■□□□□ 0.74
CACNB3-222ENST00000552465 RILPL2Q969X0 211 aa19.65■□□□□ 0.74
CACNB3-222ENST00000552465 RNPEPQ9H4A4 650 aa19.65■□□□□ 0.74
CACNB3-222ENST00000552465 NSUN3Q9H649 340 aaKnown RBP19.65■□□□□ 0.74
CACNB3-222ENST00000552465 PPP1R11O60927 126 aaPredicted RBP19.64■□□□□ 0.73
CACNB3-222ENST00000552465 CAND2O75155 1236 aa19.64■□□□□ 0.73
CACNB3-222ENST00000552465 HOXA13P31271 388 aaPredicted RBP19.64■□□□□ 0.73
CACNB3-222ENST00000552465 MTMR8Q96EF0 704 aa19.64■□□□□ 0.73
CACNB3-222ENST00000552465 ZFP91Q96JP5 570 aaPredicted RBP19.64■□□□□ 0.73
CACNB3-222ENST00000552465 PCDHA1Q9Y5I3 950 aa19.64■□□□□ 0.73
CACNB3-222ENST00000552465 ZBTB5O15062 677 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 LGALS2P05162 132 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 CTSHP09668 335 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 MRE11P49959 708 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 ADHFE1Q8IWW8 467 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 IFIH1Q9BYX4 1025 aaKnown RBP19.63■□□□□ 0.73
CACNB3-222ENST00000552465 KCNH6Q9H252 994 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 BCAS3Q9H6U6 928 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 CLDND1Q9NY35 253 aa19.63■□□□□ 0.73
CACNB3-222ENST00000552465 KLRF2D3W0D1 207 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 NCK2O43639 380 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 CCND2P30279 289 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 LTBRP36941 435 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 NHLH1Q02575 133 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 HDAC1Q13547 482 aaPredicted RBP19.62■□□□□ 0.73
CACNB3-222ENST00000552465 APBB2Q92870 758 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 IL17RAQ96F46 866 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 FBXL18Q96ME1 805 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 PIEZO1Q92508 2521 aa19.62■□□□□ 0.73
CACNB3-222ENST00000552465 GNAT1P11488 350 aa19.61■□□□□ 0.73
CACNB3-222ENST00000552465 RPAINQ86UA6 219 aa19.61■□□□□ 0.73
CACNB3-222ENST00000552465 UBAC1Q9BSL1 405 aa19.61■□□□□ 0.73
CACNB3-222ENST00000552465 USP26Q9BXU7 913 aa19.61■□□□□ 0.73
CACNB3-222ENST00000552465 UPF3BQ9BZI7 483 aaKnown RBP19.61■□□□□ 0.73
CACNB3-222ENST00000552465 KRT23Q9C075 422 aa19.61■□□□□ 0.73
CACNB3-222ENST00000552465 SETD4Q9NVD3 440 aa19.61■□□□□ 0.73
CACNB3-222ENST00000552465 COL4A6Q14031 1691 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 MICAL3Q7RTP6 2002 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 C5orf67F2Z3F1 127 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 GCOM1H8Y6P7 765 aaPredicted RBP19.6■□□□□ 0.73
CACNB3-222ENST00000552465 RB1P06400 928 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 POLR2MP0CAP2 368 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 IRS1P35568 1242 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 CTC1Q2NKJ3 1217 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 FAM26DQ5JW98 314 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 IFIT1BQ5T764 474 aaKnown RBP19.6■□□□□ 0.73
CACNB3-222ENST00000552465 CWC27Q6UX04 472 aaKnown RBP19.6■□□□□ 0.73
CACNB3-222ENST00000552465 FCHSD1Q86WN1 690 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 FIBCD1Q8N539 461 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
CACNB3-222ENST00000552465 MYH7BA7E2Y1 1941 aa19.59■□□□□ 0.73
CACNB3-222ENST00000552465 PALM3A6NDB9 673 aaPredicted RBP19.59■□□□□ 0.73
CACNB3-222ENST00000552465 NOP56O00567 594 aaKnown RBP19.59■□□□□ 0.73
CACNB3-222ENST00000552465 CTNNB1P35222 781 aa19.59■□□□□ 0.73
CACNB3-222ENST00000552465 BMPR1AP36894 532 aa19.59■□□□□ 0.73
CACNB3-222ENST00000552465 IMMTQ16891 758 aaKnown RBP19.59■□□□□ 0.73
CACNB3-222ENST00000552465 DSCC1Q9BVC3 393 aa19.59■□□□□ 0.73
CACNB3-222ENST00000552465 LNPKQ9C0E8 428 aa19.59■□□□□ 0.73
CACNB3-222ENST00000552465 LMAN2LQ9H0V9 348 aa19.59■□□□□ 0.73
CACNB3-222ENST00000552465 SPATA31C2B4DYI2 1134 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 GRM6O15303 877 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 LINC00271P0C7V0 271 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 ICAM3P32942 547 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 ADAM17P78536 824 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 HYAL1Q12794 435 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 TRAF1Q13077 416 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 NEDD9Q14511 834 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 SEC23AQ15436 765 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 SMAD2Q15796 467 aaKnown RBP19.58■□□□□ 0.72
CACNB3-222ENST00000552465 SLC35G1Q2M3R5 365 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 METTL7BQ6UX53 244 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 HFE2Q6ZVN8 426 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 CYFIP1Q7L576 1253 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 GPR20Q99678 358 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 C11orf84Q9BUA3 381 aaPredicted RBP19.58■□□□□ 0.72
CACNB3-222ENST00000552465 CNNM2Q9H8M5 875 aa19.58■□□□□ 0.72
CACNB3-222ENST00000552465 CHRNA1P02708 482 aa19.57■□□□□ 0.72
CACNB3-222ENST00000552465 MRPS9P82933 396 aaKnown RBP19.57■□□□□ 0.72
CACNB3-222ENST00000552465 DLX2Q07687 328 aaPredicted RBP19.57■□□□□ 0.72
CACNB3-222ENST00000552465 GNPTABQ3T906 1256 aa19.57■□□□□ 0.72
CACNB3-222ENST00000552465 HOMER1Q86YM7 354 aa19.57■□□□□ 0.72
CACNB3-222ENST00000552465 INPP4AQ96PE3 977 aaPredicted RBP19.57■□□□□ 0.72
CACNB3-222ENST00000552465 PIGSQ96S52 555 aa19.57■□□□□ 0.72
CACNB3-222ENST00000552465 RIOX1Q9H6W3 641 aa19.57■□□□□ 0.72
CACNB3-222ENST00000552465 DIAPH3Q9NSV4 1193 aa19.57■□□□□ 0.72
CACNB3-222ENST00000552465 RWDD3Q9Y3V2 267 aa19.57■□□□□ 0.72
CACNB3-222ENST00000552465 MBTPS2O43462 519 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 STAM2O75886 525 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 ARHGAP4P98171 946 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 SEMA3FQ13275 785 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 CLUL1Q15846 466 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 TRIM50Q86XT4 487 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 LMBR1Q8WVP7 490 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 MFSD14AQ96MC6 490 aa19.56■□□□□ 0.72
CACNB3-222ENST00000552465 POP1Q99575 1024 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms