RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 PCMTD1Q96MG8 357 aaPredicted RBP5.95□□□□□ -1.46
CCNT1-204ENST00000551989 NOX5Q96PH1 765 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 RUFY1Q96T51 708 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 PSMD1Q99460 953 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 EYA3Q99504 573 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 TMEM47Q9BQJ4 181 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 RHOXF2Q9BQY4 288 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 TMUB1Q9BVT8 246 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 MXD3Q9BW11 206 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 IFIH1Q9BYX4 1025 aaKnown RBP5.95□□□□□ -1.46
CCNT1-204ENST00000551989 TMEM60Q9H2L4 133 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 NDST4Q9H3R1 872 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 IL17RBQ9NRM6 502 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 NRXN2Q9P2S2 1712 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 HPCAL4Q9UM19 191 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 SIK3Q9Y2K2 1263 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 BZW2Q9Y6E2 419 aaKnown RBP5.95□□□□□ -1.46
CCNT1-204ENST00000551989 GAKO14976 1311 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 PSME4Q14997 1843 aa5.95□□□□□ -1.46
CCNT1-204ENST00000551989 RBBP6Q7Z6E9 1792 aaKnown RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 hCG_1642624A0A1W2PR95 340 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 GOLGA6BA6NDN3 693 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 MYO1CO00159 1063 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 CYTH3O43739 400 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 AKR1B10O60218 316 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 RNF40O75150 1001 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 GFPT2O94808 682 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 SERPING1P05155 500 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 SNHG28P0DPA3 235 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 IL1R1P14778 569 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 MAGEA9P43362 315 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 TNNT3P45378 269 aaPredicted RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 ADCY7P51828 1080 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 KIF11P52732 1056 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 ST5P78524 1137 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 SKOR1P84550 965 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 TRAF1Q13077 416 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 PAK2Q13177 524 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 PPP2R5EQ16537 467 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 PTPN21Q16825 1174 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 TXNRD1Q16881 649 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 CCDC96Q2M329 555 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 LETM2Q2VYF4 491 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 EDRF1Q3B7T1 1238 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 CFAP221Q4G0U5 840 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 GPATCH4Q5T3I0 446 aaKnown RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 SWT1Q5T5J6 900 aaKnown RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 HAUS3Q68CZ6 603 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 ANKRD40Q6AI12 368 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 NCAPH2Q6IBW4 605 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 PDXDC1Q6P996 788 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 CACNA2D4Q7Z3S7 1137 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 CD302Q8IX05 232 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 CCDC65Q8IXS2 484 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 ZC3H3Q8IXZ2 948 aaKnown RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 IFT20Q8IY31 132 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 EFCAB13Q8IY85 973 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 MYOCDQ8IZQ8 938 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 NOA1Q8NC60 698 aaKnown RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 WHAMMQ8TF30 809 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 RAD54LQ92698 747 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 STAMQ92783 540 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 GPKOWQ92917 476 aaPredicted RBP eCLIP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 MTMR9Q96QG7 549 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 SH3GL2Q99962 352 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 SELENOOQ9BVL4 669 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 TRAIPQ9BWF2 469 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 RTFDC1Q9BY42 306 aaPredicted RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 EPC1Q9H2F5 836 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 ZSWIM4Q9H7M6 989 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 FAM204AQ9H8W3 233 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 EFCC1Q9HA90 598 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 STIM2Q9P246 746 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 LRWD1Q9UFC0 647 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 FBXL5Q9UKA1 691 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 MTMR7Q9Y216 660 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 FAN1Q9Y2M0 1017 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 RRP15Q9Y3B9 282 aaKnown RBP5.94□□□□□ -1.46
CCNT1-204ENST00000551989 PCDHA13Q9Y5I0 950 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 COL4A3BPQ9Y5P4 624 aa5.94□□□□□ -1.46
CCNT1-204ENST00000551989 SIPA1L1O43166 1804 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 SHTN1A0MZ66 631 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 GOLGA6CA6NDK9 693 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 LRRIQ3A6PVS8 624 aaPredicted RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 RNF225M0QZC1 329 aaPredicted RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 TBX3O15119 743 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 NMT2O60551 498 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 HSF2BPO75031 334 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 SYF2O95926 243 aaKnown RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 CPP00450 1065 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 USP17L8P0C7I0 530 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 GOLGA6DP0CG33 693 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 CYP2D6P10635 497 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 CDC25AP30304 524 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 USP8P40818 1118 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 MAGEA1P43355 309 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 CDK8P49336 464 aa5.93□□□□□ -1.46
CCNT1-204ENST00000551989 MRPL12P52815 198 aaKnown RBP5.93□□□□□ -1.46
CCNT1-204ENST00000551989 PMS1P54277 932 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms