RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, human

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-208	ENST00000551855	THRAP3	Q9Y2W1	955 aa	Known RBP	4.27	□□□□□ -1.73
CPNE8-208	ENST00000551855	TSC22D4	Q9Y3Q8	395 aa		4.27	□□□□□ -1.73
CPNE8-208	ENST00000551855	ZNF451	Q9Y4E5	1061 aa		4.27	□□□□□ -1.73
CPNE8-208	ENST00000551855	FAM83G	A6ND36	823 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	MROH6	A6NGR9	719 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	PRODH	O43272	600 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	KCNQ2	O43526	872 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	CD247	P20963	164 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	RPL13	P26373	211 aa	Known RBP	4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	THBS2	P35442	1172 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	PMS1	P54277	932 aa	Known RBP	4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	ANKRD39	Q53RE8	183 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	GLB1L	Q6UWU2	654 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	LHFPL2	Q6ZUX7	228 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	LGI4	Q8N135	537 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	FAM26E	Q8N5C1	309 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	LZTR1	Q8N653	840 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	NINJ1	Q92982	152 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	ZDHHC15	Q96MV8	337 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	CDC6	Q99741	560 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	HAUS7	Q99871	368 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	POLR3GL	Q9BT43	218 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	DHRS4	Q9BTZ2	278 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	TARS2	Q9BW92	718 aa	Known RBP	4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	PCED1A	Q9H1Q7	454 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	NCOA5	Q9HCD5	579 aa	Known RBP	4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	LRP2BP	Q9P2M1	347 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	GULP1	Q9UBP9	304 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	ING1	Q9UK53	422 aa	Predicted RBP	4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	MRPS23	Q9Y3D9	190 aa	Known RBP	4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	SLC12A7	Q9Y666	1083 aa		4.26	□□□□□ -1.73
CPNE8-208	ENST00000551855	PDE8A	O60658	829 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	S100B	P04271	92 aa	Predicted RBP	4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	VIL1	P09327	827 aa	Known RBP	4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	BRDT	Q58F21	947 aa	Predicted RBP	4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	KRT26	Q7Z3Y9	468 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	ADAT2	Q7Z6V5	191 aa	Known RBP	4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	ZNF227	Q86WZ6	799 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	LRRC47	Q8N1G4	583 aa	Known RBP	4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	TXNDC5	Q8NBS9	432 aa	Known RBP	4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	NETO2	Q8NC67	525 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	SLC7A14	Q8TBB6	771 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	JDP2	Q8WYK2	163 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	TSR2	Q969E8	191 aa	Known RBP	4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	MFSD3	Q96ES6	412 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	PEX11G	Q96HA9	241 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	DHRS1	Q96LJ7	313 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	MTA3	Q9BTC8	594 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	VPS11	Q9H270	941 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	CD248	Q9HCU0	757 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	ATP8A1	Q9Y2Q0	1164 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	FHOD1	Q9Y613	1164 aa		4.25	□□□□□ -1.73
CPNE8-208	ENST00000551855	TRBV23-1	A0A0A0MS06	115 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	TRAV20	A0A0B4J274	112 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	GSG1L2	A8MUP6	293 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	DDX3X	O00571	662 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	B4GALT3	O60512	393 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	STAT3	P40763	770 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	POU4F1	Q01851	419 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	KIAA2012	Q0VF49	1180 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	KLF10	Q13118	480 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	ZNF460	Q14592	562 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	PPP2R5D	Q14738	602 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	SLC9A5	Q14940	896 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	PRR31	Q5SQ13	230 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	HEATR6	Q6AI08	1181 aa	Known RBP	4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	FGD2	Q7Z6J4	655 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	RNF180	Q86T96	592 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	CPNE8	Q86YQ8	564 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	FMNL3	Q8IVF7	1028 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	PALM2	Q8IXS6	379 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	BTN2A2	Q8WVV5	523 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	OSBP2	Q969R2	916 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	APBA2	Q99767	749 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	AARSD1	Q9BTE6	412 aa	Known RBP	4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	KLC2	Q9H0B6	622 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	KLHL25	Q9H0H3	589 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	METTL14	Q9HCE5	456 aa	Known RBP	4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	HOMER2	Q9NSB8	354 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	GABBR1	Q9UBS5	961 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	SUGT1	Q9Y2Z0	365 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	HS3ST3A1	Q9Y663	406 aa		4.24	□□□□□ -1.73
CPNE8-208	ENST00000551855	ANKRD34B	A5PLL1	514 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	GPR42	O15529	346 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	FZD7	O75084	574 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	VAMP4	O75379	141 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	KATNA1	O75449	491 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	DNAJC8	O75937	253 aa	Predicted RBP	4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	MAP4K4	O95819	1239 aa	Predicted RBP	4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	NTRK1	P04629	796 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	CYP2C8	P10632	490 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	PABPC1	P11940	636 aa	Known RBP	4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	LRRC41	Q15345	812 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	PRSS53	Q2L4Q9	553 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	ODR4	Q5SWX8	454 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	ZNF585A	Q6P3V2	769 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	CABP7	Q86V35	215 aa		4.23	□□□□□ -1.73
CPNE8-208	ENST00000551855	KY	Q8NBH2	561 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms