RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 AARSP49588 968 aaKnown RBP eCLIP14.4□□□□□ -0.1
CACNB3-219ENST00000551544 ARID5AQ03989 594 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 DOK7Q18PE1 504 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 HERC4Q5GLZ8 1057 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-219ENST00000551544 POTEBQ6S5H4 581 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 PROM2Q8N271 834 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 LSM14BQ9BX40 385 aaKnown RBP14.4□□□□□ -0.1
CACNB3-219ENST00000551544 DMGDHQ9UI17 866 aaKnown RBP14.4□□□□□ -0.1
CACNB3-219ENST00000551544 LCMT1Q9UIC8 334 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 RRP15Q9Y3B9 282 aaKnown RBP14.4□□□□□ -0.1
CACNB3-219ENST00000551544 DNA2P51530 1060 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 POLR2FP61218 127 aaKnown RBP14.4□□□□□ -0.1
CACNB3-219ENST00000551544 ZCWPW2Q504Y3 356 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 GPBP1Q86WP2 473 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 MTMR8Q96EF0 704 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 MYH10P35580 1976 aa14.4□□□□□ -0.1
CACNB3-219ENST00000551544 TAF1LQ8IZX4 1826 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
CACNB3-219ENST00000551544 PLA2G4BP0C869 781 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 TCP1P17987 556 aaKnown RBP14.39□□□□□ -0.11
CACNB3-219ENST00000551544 ADRA2BP18089 450 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 STAT3P40763 770 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 ASTE1Q2TB18 679 aaPredicted RBP14.39□□□□□ -0.11
CACNB3-219ENST00000551544 FAM83BQ5T0W9 1011 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 GPATCH4Q5T3I0 446 aaKnown RBP14.39□□□□□ -0.11
CACNB3-219ENST00000551544 SFMBT2Q5VUG0 894 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 HGSNATQ68CP4 663 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 MMGT1Q8N4V1 131 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 FAM196BA6NMK8 535 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 PPEF1O14829 653 aaPredicted RBP14.39□□□□□ -0.11
CACNB3-219ENST00000551544 DDR1Q08345 913 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 SLC9C1Q4G0N8 1177 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 SND1Q7KZF4 910 aaKnown RBP eCLIP14.39□□□□□ -0.11
CACNB3-219ENST00000551544 CCDC65Q8IXS2 484 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 AFAP1L1Q8TED9 768 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 NOX5Q96PH1 765 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 NT5C3AQ9H0P0 336 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.39□□□□□ -0.11
CACNB3-219ENST00000551544 NHSQ6T4R5 1651 aa14.39□□□□□ -0.11
CACNB3-219ENST00000551544 ZC3H4Q9UPT8 1303 aaKnown RBP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 NOL4O94818 638 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 GCFC2P16383 781 aaKnown RBP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 HOXA10P31260 410 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 SEPT2Q15019 361 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 C10orf67Q8IYJ2 551 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 ZC3H12CQ9C0D7 883 aaKnown RBP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 COA1Q9GZY4 146 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 CEP72Q9P209 647 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 LTBP4Q8N2S1 1624 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 KDM3AQ9Y4C1 1321 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 SSU72P8A0A1W2PR75 194 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 TRIM66O15016 1216 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 TLR2O60603 784 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 PRPF6O94906 941 aaKnown RBP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 HLA-DOAP06340 250 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 PRLRP16471 622 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 PAFAH1B1P43034 410 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 NFIAQ12857 509 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 RAPGEF1Q13905 1077 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 SHROOM1Q2M3G4 852 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 QRICH1Q2TAL8 776 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 CDC42EP5Q6NZY7 148 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 FOXR1Q6PIV2 292 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-219ENST00000551544 MS4A14Q96JA4 679 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 CRAMP1Q96RY5 1269 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 TLR10Q9BXR5 811 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 RSPH14Q9UHP6 348 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 FAM184BQ9ULE4 1060 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 PCDHA1Q9Y5I3 950 aa14.38□□□□□ -0.11
CACNB3-219ENST00000551544 PJA2O43164 708 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 EPS15P42566 896 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
CACNB3-219ENST00000551544 ZFPM1Q8IX07 1006 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 EDEM3Q9BZQ6 932 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 GOLGA6BA6NDN3 693 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 AGPSO00116 658 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 SERPING1P05155 500 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 CACNB3P54284 484 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 KLHDC7AQ5VTJ3 777 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 AENQ8WTP8 325 aaKnown RBP14.37□□□□□ -0.11
CACNB3-219ENST00000551544 SCFD1Q8WVM8 642 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 TBC1D5Q92609 795 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 EMILIN3Q9NT22 766 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
CACNB3-219ENST00000551544 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 G3V3G9 751 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 MED24O75448 989 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 POTEIP0CG38 1075 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 CYP11B2P19099 503 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 SNAP25P60880 206 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 TCP10Q12799 353 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 ADAM9Q13443 819 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 POTEGQ6S5H5 508 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 SP8Q8IXZ3 490 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 CEP63Q96MT8 703 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms