RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 ZNF202O95125 648 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 LIG1P18858 919 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 SFNP31947 248 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 PSMC4P43686 418 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 JAK3P52333 1124 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 GRIN1Q05586 938 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 SNW1Q13573 536 aaKnown RBP11.7□□□□□ -0.54
NEK3-203ENST00000551355 NEDD9Q14511 834 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 CCDC183Q5T5S1 534 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 CABP7Q86V35 215 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 SCFD2Q8WU76 684 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 USP6NLQ92738 828 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 CDK5RAP3Q96JB5 506 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 MAML3Q96JK9 1138 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 FGD4Q96M96 766 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 APBA2Q99767 749 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 R3HDMLQ9H3Y0 253 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 GOLPH3LQ9H4A5 285 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 VAV3Q9UKW4 847 aa11.7□□□□□ -0.54
NEK3-203ENST00000551355 POLR2DO15514 142 aaKnown RBP11.69□□□□□ -0.54
NEK3-203ENST00000551355 RGS20O76081 388 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 TBC1D8O95759 1140 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 SLFN14P0C7P3 912 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 SPIRE1Q08AE8 756 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 TTLL4Q14679 1199 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 EPHA7Q15375 998 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 SPECC1Q5M775 1068 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 HYIQ5T013 277 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 ZNF746Q6NUN9 644 aaPredicted RBP11.69□□□□□ -0.54
NEK3-203ENST00000551355 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
NEK3-203ENST00000551355 B3GNT9Q6UX72 402 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 SMAP1Q8IYB5 467 aaPredicted RBP11.69□□□□□ -0.54
NEK3-203ENST00000551355 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 ERO1AQ96HE7 468 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 TINF2Q9BSI4 451 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 POLR3CQ9BUI4 534 aaPredicted RBP11.69□□□□□ -0.54
NEK3-203ENST00000551355 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 ABHD16BQ9H3Z7 469 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 DISC1Q9NRI5 854 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 STK17AQ9UEE5 414 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 NRBP1Q9UHY1 535 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 GJD2Q9UKL4 321 aa11.69□□□□□ -0.54
NEK3-203ENST00000551355 ZNF236Q9UL36 1845 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 POTEMA6NI47 508 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 WDR64B1ANS9 1081 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 DHX15O43143 795 aaKnown RBP11.68□□□□□ -0.54
NEK3-203ENST00000551355 DKC1O60832 514 aaKnown RBP eCLIP11.68□□□□□ -0.54
NEK3-203ENST00000551355 MYL1P05976 194 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 KCNA2P16389 499 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 RPA1P27694 616 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 STAT6P42226 847 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 PRMT2P55345 433 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 NCAPH2Q6IBW4 605 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 SEPT14Q6ZU15 432 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 CNNM3Q8NE01 707 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 LRRC27Q9C0I9 530 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 TNMDQ9H2S6 317 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 CLSTN2Q9H4D0 955 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 JPH1Q9HDC5 661 aaPredicted RBP11.68□□□□□ -0.54
NEK3-203ENST00000551355 TUFT1Q9NNX1 390 aa11.68□□□□□ -0.54
NEK3-203ENST00000551355 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.68□□□□□ -0.54
NEK3-203ENST00000551355 SMCHD1A6NHR9 2005 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
NEK3-203ENST00000551355 GPR25O00155 361 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 NKRFO15226 690 aaKnown RBP eCLIP11.67□□□□□ -0.54
NEK3-203ENST00000551355 FKTNO75072 461 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 CCT6AP40227 531 aaKnown RBP11.67□□□□□ -0.54
NEK3-203ENST00000551355 HTRA3P83110 453 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 AMPD3Q01432 767 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 SEMA3FQ13275 785 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
NEK3-203ENST00000551355 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 METTL7BQ6UX53 244 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 KRBA2Q6ZNG9 492 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 USP49Q70CQ1 688 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 MIER3Q7Z3K6 550 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
NEK3-203ENST00000551355 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 UNC45AQ9H3U1 944 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 SLC9A2Q9UBY0 812 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 PCDHA10Q9Y5I2 948 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 THSD7BQ9C0I4 1608 aa11.67□□□□□ -0.54
NEK3-203ENST00000551355 PP2D1A8MPX8 630 aa11.66□□□□□ -0.54
NEK3-203ENST00000551355 ATP9AO75110 1047 aa11.66□□□□□ -0.54
NEK3-203ENST00000551355 SNAI1O95863 264 aaPredicted RBP11.66□□□□□ -0.54
NEK3-203ENST00000551355 P4HBP07237 508 aaKnown RBP11.66□□□□□ -0.54
NEK3-203ENST00000551355 PSAPP07602 524 aa11.66□□□□□ -0.54
NEK3-203ENST00000551355 CDC25AP30304 524 aa11.66□□□□□ -0.54
NEK3-203ENST00000551355 ACVR2BQ13705 512 aa11.66□□□□□ -0.54
NEK3-203ENST00000551355 KARSQ15046 597 aaKnown RBP11.66□□□□□ -0.54
NEK3-203ENST00000551355 E2F4Q16254 413 aa11.66□□□□□ -0.54
NEK3-203ENST00000551355 LONRF3Q496Y0 759 aa11.66□□□□□ -0.54
NEK3-203ENST00000551355 TMEM119Q4V9L6 283 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms