RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 HABP4Q5JVS0 413 aaKnown RBP6.98□□□□□ -1.29
CPSF6-206ENST00000550987 ABHD17CQ6PCB6 329 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 FKBP9P1Q75LS8 142 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 ZNF765Q7L2R6 523 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 ALYREFQ86V81 257 aaKnown RBP6.98□□□□□ -1.29
CPSF6-206ENST00000550987 PASD1Q8IV76 773 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 THEMISQ8N1K5 641 aaPredicted RBP6.98□□□□□ -1.29
CPSF6-206ENST00000550987 CNTD1Q8N815 330 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 PCDH19Q8TAB3 1148 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 UBE2FQ969M7 185 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 GCC1Q96CN9 775 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 YIPF4Q9BSR8 244 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 C7orf69Q9H7B7 122 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 CATSPERZQ9NTU4 200 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 GABBR1Q9UBS5 961 aa6.98□□□□□ -1.29
CPSF6-206ENST00000550987 MAP3K5Q99683 1374 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 FAM170BA6NMN3 283 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 FAM47E-STBD1D6RA91 191 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 ARVCFO00192 962 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 CBX4O00257 560 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 FOXN1O15353 648 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 TBC1D8O95759 1140 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 MAP4K4O95819 1239 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-206ENST00000550987 SOD2P04179 222 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 BPIP17213 487 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 CCND1P24385 295 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 LTKP29376 864 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 RAB27AP51159 221 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 LAPTM5Q13571 262 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 NFE2Q16621 373 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-206ENST00000550987 ATP13A4Q4VNC1 1196 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 ZBTB46Q86UZ6 589 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 TSPYL5Q86VY4 417 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-206ENST00000550987 CHPFQ8IZ52 775 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 USHBP1Q8N6Y0 703 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 LINC00116Q8NCU8 138 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 RCBTB1Q8NDN9 531 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 COG1Q8WTW3 980 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 FBXW5Q969U6 566 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 C8orf48Q96LL4 319 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 FOXP3Q9BZS1 431 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 ATG3Q9NT62 314 aa6.97□□□□□ -1.29
CPSF6-206ENST00000550987 THG1LQ9NWX6 298 aaKnown RBP6.97□□□□□ -1.29
CPSF6-206ENST00000550987 DHX57Q6P158 1386 aaKnown RBP6.96□□□□□ -1.29
CPSF6-206ENST00000550987 PTCH1Q13635 1447 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 WDR64B1ANS9 1081 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 H3BS24 57 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 TSPAN6O43657 245 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 ZNF205O95201 554 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 SRFP11831 508 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 ENDOUP21128 410 aaKnown RBP6.96□□□□□ -1.3
CPSF6-206ENST00000550987 KPNA1P52294 538 aaPredicted RBP6.96□□□□□ -1.3
CPSF6-206ENST00000550987 MCL1Q07820 350 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 TMEM177Q53S58 311 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 CCDC103Q8IW40 242 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 CCDC146Q8IYE0 955 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 C2orf69Q8N8R5 385 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 PANK1Q8TE04 598 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 TP53INP1Q96A56 240 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 SYTL4Q96C24 671 aaPredicted RBP6.96□□□□□ -1.3
CPSF6-206ENST00000550987 HSPA12BQ96MM6 686 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 PTCHD1Q96NR3 888 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 PSMD1Q99460 953 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 MMP19Q99542 508 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 ORAI3Q9BRQ5 295 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 LRRC4CQ9HCJ2 640 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 AP5S1Q9NUS5 200 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 ZIM2Q9NZV7 527 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 DUSP13Q9UII6 198 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 TRHDEQ9UKU6 1024 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 SPEF1Q9Y4P9 236 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 NKTRP30414 1462 aaKnown RBP6.96□□□□□ -1.3
CPSF6-206ENST00000550987 MEGF6O75095 1541 aa6.96□□□□□ -1.3
CPSF6-206ENST00000550987 TNRQ92752 1358 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 SAMD9LQ8IVG5 1584 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 CCDC194A0A1B0GVG4 234 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 SHTN1A0MZ66 631 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 CCDC66A2RUB6 948 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 ARNTLO00327 626 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 KIF3BO15066 747 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 RPL10P27635 214 aaKnown RBP6.95□□□□□ -1.3
CPSF6-206ENST00000550987 FAPQ12884 760 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 TESK1Q15569 626 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 CRY1Q16526 586 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 SYDE2Q5VT97 1194 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 RNF111Q6ZNA4 994 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 EP400NLQ6ZTU2 488 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 HDGFL2Q7Z4V5 671 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-206ENST00000550987 FAM181AQ8N9Y4 354 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 SMC1BQ8NDV3 1235 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 GATA6Q92908 595 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 KCNJ15Q99712 375 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 OSBPL1AQ9BXW6 950 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 PCGF6Q9BYE7 350 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 CELF4Q9BZC1 486 aaKnown RBP6.95□□□□□ -1.3
CPSF6-206ENST00000550987 IPPKQ9H8X2 491 aa6.95□□□□□ -1.3
CPSF6-206ENST00000550987 SLC52A1Q9NWF4 448 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms